FMO03936.5prime Sequence
633 bp (633 high quality bases) assembled on 2008-07-21
> FMO03936.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAATCTGCGGTA
TATCTGCACTGTGGCTCTCGTGCCAACGCTCTGCGTGCTGCTGGTGCTTC
TGCTGGAATTCGTGGAGGAGGGCCTGGCCCAGAATTCCGATCCCCTTTTC
GAGCTTCCCGTCCAGCTGGTCGGCTTCCCCGTAATCGTGCTATCCGTCCG
CCTGTCCCAGTTCGCCAAGAAGTTGGCCTACTCCCTCAGTCCCAGTACAT
ATAGATCTCGCACCAGAAGGGATACGGCTCATCCTCTGGCTCTTGATGCT
GAACTGGCCCAGAAACAGATACTGGGTGAGTTCGGACCCCAAGCCTGCAT
CCTGGAGGAGCCGTGCCGTGTCCATGCCTCTAGATACTCAGGCAGTTCTG
ATGGCCGCTTTCCTGATGGAAAAGCAAAGCCACATGCTGCCTGGTCGGAA
GTGTTGCGGAACTACAAAGTGCAATCGGGCGTCAGTGGGATGAAGCAATG
GTACCTTCTATCCCTGTTCATCGGCGATGCTGTGCGGGATGTGCCGCTGT
GCAAGCACCTGGCCAAAAGGATGCCGTGTCCAGGAGTCGGACCTCTGCCG
GCGCCCCAACCACGAGCAAGCTTTCTAGACCAT
FMO03936.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:27:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7330-RB | 1166 | CG7330-RB | 123..702 | 36..615 | 2900 | 100 | Plus |
| CG7330-RA | 986 | CG7330-RA | 123..702 | 36..615 | 2900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18150677..18150891 | 245..459 | 1075 | 100 | Plus |
| 3L | 28110227 | 3L | 18149045..18149256 | 36..247 | 1060 | 100 | Plus |
| 3L | 28110227 | 3L | 18153186..18153343 | 458..615 | 790 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:27:42 has no hits.
FMO03936.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:00 Download gff for
FMO03936.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7330-RA | 123..707 | 36..620 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:23:56 Download gff for
FMO03936.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7330-RA | 121..705 | 36..620 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:12 Download gff for
FMO03936.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7330-RA | 123..707 | 36..620 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:12 Download gff for
FMO03936.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18149045..18149253 | 36..244 | 100 | -> | Plus |
| 3L | 18150677..18150890 | 245..458 | 100 | -> | Plus |
| 3L | 18153187..18153348 | 459..620 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:00 Download gff for
FMO03936.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18142145..18142353 | 36..244 | 100 | -> | Plus |
| arm_3L | 18143777..18143990 | 245..458 | 100 | -> | Plus |
| arm_3L | 18146287..18146448 | 459..620 | 98 | | Plus |
