FMO03937.5prime Sequence
486 bp (486 high quality bases) assembled on 2008-07-21
> FMO03937.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCCAAGGTTCG
CCGCAGTCGCAAACCACCGCCAGACGGTTGGGAGCTGATCGAACCAACTC
TCGAGGAACTGGAGCAAAAAATGCGCGAAGCCGAAACGGAACCGCACGAG
GGCAAACGCATTACGGAATCCCTTTGGCCCATTTTCAAGATCCACCACCA
GAAGACACGATACATCTACGATCTATTCTATCGCCGGAAAGCCATCAGCC
GGGAATTGTACGACTACTGTCTGAAGGAGAAGATTGCCGATGGCAATCTG
ATTGCCAAGTGGAAGAAGTCTGGATACGAGAACCTATGCTGCCTGCGCTG
CATTCAAACGAGGGACACCAATTTCGGCACGAACTGCATATGCCGGGTGC
CCAAATGCAAACTGGAAGAGGGTCGGATCGTTGAGTGTGTCCACTGCGGT
TGTCGCGGCTGCTCCGGTGCAAGCTTTCTAGACCAT
FMO03937.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:28:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(1)10Bb-RA | 934 | CG1639-RA | 124..555 | 37..468 | 2160 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:28:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11324673..11325012 | 468..129 | 1700 | 100 | Minus |
| X | 23542271 | X | 11325092..11325185 | 130..37 | 470 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:28:55 has no hits.
FMO03937.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:39:13 Download gff for
FMO03937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)10Bb-RA | 116..561 | 29..476 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:25:11 Download gff for
FMO03937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)10Bb-RA | 107..552 | 29..476 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:20:06 Download gff for
FMO03937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(1)10Bb-RA | 116..561 | 29..476 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:20:06 Download gff for
FMO03937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11324667..11325010 | 131..476 | 98 | <- | Minus |
| X | 11325092..11325193 | 29..130 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:39:13 Download gff for
FMO03937.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11219125..11219226 | 29..130 | 96 | | Minus |
| arm_X | 11218700..11219043 | 131..476 | 98 | <- | Minus |
