FMO03942.5prime Sequence
336 bp (41 high quality bases) assembled on 2008-07-21
> FMO03942.5prime
TCGTATAGCATACCTTATACGAAGTTATCAATCCACATGAACAACCATAA
TTAAATGCAAAGTCAGCCAAAGCAGCATCAATCCCGGCTGGGTGGCCACC
GAGATCGTTCCGGACGAAACGAAGGCCAAGCTGGGCGAGGTAATCCTCCA
GGCGGACGACGTCGCTCAGGCTGTACTGTACGCCCTATCCACGCCACCGC
ACACTCAGGTGGAGCAGATAACGCTGAGGGCGGTGGGCGAATATTTCTGA
TACCCCGACAACACAACCCACCCCCCGAGATTATGCCATCGACTTGCACT
GGAACAGTAAAAATCAAAGCAAGCTTTCTAGACCAT
FMO03942.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10962-RB | 1074 | CG10962-RB | 602..846 | 74..318 | 1135 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8973136..8973380 | 318..74 | 1135 | 97.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:43:39 has no hits.
FMO03942.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:37:06 Download gff for
FMO03942.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RB | 597..851 | 67..323 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:26:20 Download gff for
FMO03942.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RA | 847..1142 | 29..323 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:00 Download gff for
FMO03942.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RB | 597..851 | 67..323 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:00 Download gff for
FMO03942.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8973131..8973380 | 74..323 | 96 | <- | Minus |
| X | 8979454..8979499 | 29..73 | 91 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:37:06 Download gff for
FMO03942.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8867164..8867413 | 74..323 | 96 | <- | Minus |
| arm_X | 8873487..8873532 | 29..73 | 91 | | Minus |
