FMO03952.5prime Sequence
512 bp (512 high quality bases) assembled on 2008-07-21
> FMO03952.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCTGAGCCAACTG
CCTCTGTTCGCTGGGGGCGAGATTGTTCGGGGCTTCGGACGCGGCTCCAA
AGAGCTGGGCATCCCAACAGCTAACTTTCCGCTGGAGGTGGTGAAATCGC
TGCCGGAATCCCTGCCCACTGGCGCGTACTACGGTTGGGCAAACGTGGAT
AATGGACCCGTGCACAAGATGGTCCTCAGCATCGGCTGGAATCCCTTCTA
CAACAACAAGGAGAAGAGCGTGGAGACGCACATGCTACACGACTTTAACT
GTGACCTTTACGGCCAGACACTCAAGATATGCATTGTAGGCTACCTGCGA
CCGGAGCGCAGTTTCGACTCCCTGGAGTCACTGATTGCCGCCATCCGCGG
GGACATCGAGCAGGCCAAGGCGTTCCTCGACGAGGCGGACAAGGCCAAGC
TGAAGGAGGCTCCGTTCTTTACGGAGAAGCTCTGCTCGTCGAAAGCAAGC
TTTCTAGACCAT
FMO03952.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:26:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2846-RB | 997 | CG2846-RB | 278..736 | 36..494 | 2295 | 100 | Plus |
| CG2846-RA | 1210 | CG2846-RA | 278..736 | 36..494 | 2295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:26:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7912491..7912866 | 494..119 | 1880 | 100 | Minus |
| 3R | 32079331 | 3R | 7912929..7913013 | 120..36 | 425 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:26:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dbuz\Osvaldo | 9045 | Dbuz\Osvaldo DBU133521 9045bp Derived from AJ133521 (Rel. 60, Last updated, Version 2). | 3904..3942 | 431..469 | 105 | 74.4 | Plus |
FMO03952.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:40 Download gff for
FMO03952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2846-RA | 269..740 | 26..500 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:25:55 Download gff for
FMO03952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2846-RA | 256..727 | 26..500 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:14:33 Download gff for
FMO03952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2846-RA | 269..740 | 26..500 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:14:33 Download gff for
FMO03952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7912487..7912864 | 121..500 | 99 | <- | Minus |
| 3R | 7912929..7913022 | 26..120 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:40 Download gff for
FMO03952.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3738651..3738744 | 26..120 | 95 | | Minus |
| arm_3R | 3738209..3738586 | 121..500 | 99 | <- | Minus |
