FMO03959.5prime Sequence
844 bp (844 high quality bases) assembled on 2008-07-21
> FMO03959.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGTTGAGAAAATCGT
TTGCCAACCTACCCCGCTTTGGTCAGATGTGCGGTCTGCCACGACGCCTG
CAGAGCACACAGCCGGAGCAATCGGTGGAAACGGAACCGGAGGACATCGC
CCTGGTGGAACAGCGGATTCTGAAGCATCCGGACTACTTCCAAGTGCACA
ACCTGTTCACCGTGCGCGACCTCTTCAATGCCCGAGTGCACTATGGCCAC
AAGGAGGGCTCCCTGGACGACCGAATGCGTCCGTACTTGTTCGGCAGTCG
ATTAGGTCATCTGATCTTCGATCTGGACAAGACGGCATCACATCTGCGCG
ATGCCCTCAACTTTGCCGCACACATTGCCTTCCGAGATGGCATCATTCTG
TTCTTCAACCGCAACGCCATGAACTCACATCTCGTGGAGCGAAAGGCCCA
GGAGGCCGGTGAATTCTCGCACACTCGCTTTTGGCGCGGCGGCATCTTTA
CCAATGCCAATGTGCAATTCGATGCGGTCACCAGGCTGCCCGATCTTTGC
ATTTTCCTCAACACTCAAAACAACGTTATGGCTCAGCACACGGCGGTTCG
GGACGCCGCCAAAATGGCCATACCAACCATTGGCATAGTGGACAGCAATT
GCAATCCCAACCTGATCACCTATCCGGTGCCCGGCAACGATGACTCGCCG
GCCGCAGTGGAGCTCTATTGCAACCTCTTCAAGGAAGCCATACTGCGTGG
CAAGCGGGAACGACGCCAACTCCTTGGCCTTCCGCCTCTGGACGAATCCC
AGCCGCGGCGCAGTCGCAAAACTAAAGCAAGCTTTCTAGACCAT
FMO03959.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:00:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS2-RA | 924 | CG2937-RA | 57..847 | 35..825 | 3940 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:00:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4849516..4850281 | 825..60 | 3815 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:00:03 has no hits.
FMO03959.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:15 Download gff for
FMO03959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS2-RA | 57..851 | 35..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:19:51 Download gff for
FMO03959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS2-RA | 56..850 | 35..830 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:36:18 Download gff for
FMO03959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS2-RA | 57..851 | 35..830 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:36:18 Download gff for
FMO03959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4849512..4850281 | 60..830 | 99 | <- | Minus |
| 2L | 4850339..4850363 | 35..59 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:15 Download gff for
FMO03959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4849512..4850281 | 60..830 | 99 | <- | Minus |
| arm_2L | 4850339..4850363 | 35..59 | 100 | | Minus |
