FMO03961.5prime Sequence
1244 bp (1052 high quality bases) assembled on 2008-07-21
> FMO03961.5prime
CTTCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGGTTCGAGTT
CTGTTCCTCCACCCGGATTTGGGCATCGGAGGAGCTGAGCGACTGGTGGT
GGATGCCGCTCTGGCACTCAAGGAGCGGGGTCACCAGGTTAGCTTCCTAA
CGAATCACCACGACAGCACGCACTGCTTCAAGGAGACGGCGGACGGCACT
TTTCCGGTCCACGTAGTGGGCGACTGGTTGCCACGCGGGCTCTTCGGAAG
ATTCTATGCCATCTGTGCCTATCTGCGCATGCTCTATGCGGCGATCTACG
CCAGTTTTTTTATGCCCCAGCGGGAGCAAGTGGACGTGGTGGTGTGCGAC
CTAATCTCTGTGTGCATTCCAGTTCTCCGCTTCGCCCCTCATCGTCCGAA
GGTTCTATTCTACTGCCACTTTCCGGATCAGCTTCTCAGCAGCCGTGAAG
GACTGCTAAAGCGGCTGTACCGCCTGCCCATCAACTGGCTGGAGGAGCAC
ACGATCGGTCTAGCAGACAAGGTGCTGGTCAACTCCAAATTTACGCTACG
TGTCTTCCAGGACACCTTTCGCCGACTGAGCACGGTGCCGGATGTGCTGT
ATCCTTCACTGCACACCCAGTACTTTGACCAGATGCAGAAAAAGCTAGAA
CAGCGGTCTGCTTTACTGGACGAGCCAGTGCATCCGCGAGTACCACTCAA
CGCCTTTATCTATCTGGACATCAATCGCTACGAGCGCAAGAAGACCACGC
CCTTGCCTTACATTCCCTGCGCCTTCTGGGCGACATGCTGCCCGCCACGG
ACTTCAAGCGCTGTCGCCTGATCATCGCCGGGGGTTACGACACCAGATGC
ATGGGAAAATGTGGAGCACTTTCGCGGAGCTGGAGCACCTTACGGAGGAG
TTGAAACTTCAGATCACGTTGTGCTGCTACGCTCGCCTACCGACGAGGAA
GAATGTCGCCTGCCTCTTTGCCGCTTCACTGTCCTGCTGTATACGCCAGA
GACGAGCACCTTCGGCATTGTGCCGCCTGGAAGGCCATGTACTGCTCGAA
GCCAGTCGTAGCCAAAAACAGCGGCGGAACCCACTGAACCGGTGGGTGAA
GCACTTCCACTGGCCTTCTGTGCGAAAGACTGAAAAAGAGCTTTGGTGGA
ACAATGCCTCCAGCTTTCCGAAGAGCACTGCCAGTTAAGAGTGGAGAACA
CAGGATCCAAACGGGGGTGCGACGACACAGAGGCTCTCCTCCTT
FMO03961.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1291-RA | 1477 | CG1291-RA | 184..1304 | 38..1167 | 5065 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3143991..3145102 | 38..1157 | 4670 | 96.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:05:15 has no hits.
FMO03961.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:38:43 Download gff for
FMO03961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1291-RA | 180..1317 | 32..1177 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:34:05 Download gff for
FMO03961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1291-RA | 178..1315 | 32..1177 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:53:49 Download gff for
FMO03961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1291-RA | 180..1317 | 32..1177 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:53:49 Download gff for
FMO03961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3143987..3145124 | 32..1177 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:38:43 Download gff for
FMO03961.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3143987..3145124 | 32..1177 | 96 | | Plus |
