Clone FMO03971 Report

Search the DGRC for FMO03971

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:39
Well:71
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14687-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03971.5prime Sequence

467 bp (467 high quality bases) assembled on 2008-07-21

> FMO03971.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGTACATTTACCCC
AGCTCACCGGAATCAGCATCGTCCTTGCAGTCCGAAGAGAGTGCGGCCAT
TAAGATTCAGGCCGGATTTCGTGGCTACCGTGTGCGCAAAGAGATCCATC
GATCCAGCAAGAATCCCCATCCCAGGCGGAATCAGCGACAGCGTCCAAAG
AACAACGGCCTCATGGAAAACCAGAACAATACGGGAAATCCCCGTCCCAG
CGGCGAGGATCAGCATACGGCCACCGAGAATGGTGGTAAATCCGTGGAGG
ATCGTAGTGCCACCAAGATACAGGCGGGATTCCGGGGATTCCTGGTGCGA
AAGAAGCAGAAAATCGCCACCGATGCCGCTGTTAAAATTCAGGCTGGCTT
CCGGGGATTCAAAACACGCAAAGAATTGAAACAATGCGAGCCCATTGTGG
CAAGCTTTCTAGACCAT

FMO03971.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:31:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG14687-RA 740 CG14687-RA 129..543 35..449 2075 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:31:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 10793032..10793446 35..449 2075 100 Plus
Blast to na_te.dros performed on 2014-11-28 19:31:08 has no hits.

FMO03971.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:40:24 Download gff for FMO03971.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14687-RA 121..553 28..458 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:21:58 Download gff for FMO03971.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14687-RA 119..551 28..458 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:11 Download gff for FMO03971.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14687-RA 121..553 28..458 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:11 Download gff for FMO03971.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 10793024..10793456 28..458 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:40:24 Download gff for FMO03971.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 6618746..6619178 28..458 98   Plus