FMO03975.5prime Sequence
765 bp (765 high quality bases) assembled on 2008-07-21
> FMO03975.5prime
TCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGGCCGAGTATAG
ACCATCCACTTCGTGGCCCCATCGGATGATGAGCTTCCAGTGCCGGCAGG
CGGACCTGAATCGCCTGGTGATGAACTATCTGGTTACAGAGGGATATCAA
GAGGCCGCCAAGCGTTTCATGACCGAGGCGTCTGTGAAGCCGGGTCCACA
CATGGACACCATCGGGGATCGTTTAAGGATTCAGGATGCCGTGCGTGTGG
GTCAGGTCAAGTACGCCATGGACCTGGCCACACGGATCTATCCACGGCTC
TTCGAGACCGACAACTATGTATTTTTTCACATGCAACAGTTGCGCCTGAT
CGAGATGATCAGGGATCAGAAGATGGAGAAGGCCTTGAAGTTTGCCCAGA
GCAAGGCAGCGGGCTTTTCCAAGGTCGATCCAAGTCACTACCACGAAGTG
GAGCGGACCATGGGTCTGCTGGCCTTCGATCGGCCGGAATACAGTCCCTA
CGGGGAGCTGATGTACTACTCATATCGCCAAAAGGTGGCCGGTGAAATGA
ATGCAGCCATGTTACGCTGCCACGAGGATGAGAGTAAGAGCAAAGAGGAG
CCCATGGAGCCAAGAATGATGTTCCTCATCAAGCTAATCCTTTGGGCCCA
GGCCAAGCTGGATCGCGAGGGATTCACCGACTACCACAAGCTTGATCTTG
GCCACGCGGATTTCGAGGAAGAGTTCCGCCGGAGTTTCCAGGGTTTCGCA
AGCTTTCTAGACCAT
FMO03975.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:30:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18467-RA | 1462 | CG18467-RA | 549..1259 | 37..747 | 3555 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:30:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17441671..17442280 | 138..747 | 3050 | 100 | Plus |
| 2R | 25286936 | 2R | 17441515..17441617 | 37..139 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:30:40 has no hits.
FMO03975.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:13 Download gff for
FMO03975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18467-RA | 547..1263 | 34..752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:16:19 Download gff for
FMO03975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18467-RA | 240..956 | 34..752 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:19:43 Download gff for
FMO03975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18467-RA | 547..1263 | 34..752 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:19:43 Download gff for
FMO03975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17441513..17441617 | 34..139 | 99 | -> | Plus |
| 2R | 17441673..17442284 | 140..752 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:13 Download gff for
FMO03975.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13329018..13329122 | 34..139 | 99 | -> | Plus |
| arm_2R | 13329178..13329789 | 140..752 | 99 | | Plus |
