FMO03981.5prime Sequence
1219 bp (133 high quality bases) assembled on 2008-07-21
> FMO03981.5prime
TCGTATAGCATACATTATACGAAGTTATCAATCCACATGTCAGGGTCCAT
TACACAAAAGTTTTACAAGTTGGATATAAATCGAACGGAATGGGAGATCC
CGGATATATACCAGGATCTGCCGCCCGTGGGATCGGGAGCTTACGGACAG
GTGTCGAATGCCGTTGTTCGTGGCACCAATATGGGTGTGGCCATTAAAAA
GCTTGCCATGCCTTTTCTTTTTTTTGTCCATGCAAAGAGGACGTACCGGG
AGCTTCAACTTTTAAAGCATATGGATCATGAGAACGTAATCGGTCTGCTG
GACATATTCCATCCACATCCCGCTAATGGATCGCTGGAGAACTTCCAACA
GGTGTACTTGGTTACCCACTTGATGGACGCAGATCTGAACAACATCATAC
GGATGCCGCACTTGTCCGACGACCACATCCAGTTTTTAGTCTACCAGATA
CTCCGTGGCTTGAACTATATCCACAGCGCCGGAGGATCCACCGTGATCTT
TTCCCTCAAACATTGCCGTCAACGAGGATTGCGAGCTGCTCATTCTAAAC
TTCAGGCTGGCCCGCCCAACAGAGAACGAGATGACAGGCTATGTGGCCAC
GCGTTGGTACCGGGCACCTGAAATAATGCTCAATTGGATGCACTACCACC
AAACAGTGAACATCTGGTCGGTGGGCTGCATCATGGCCGATCTAATTACC
AGACGAACGCTCTTCCCAGGCACCGACCATATTCACCAGCTAAACCTGAT
TATGGAGATGTTGGGCACGCCACCCGCCGAATTTTTGAATAATATCTCAT
CGGAAGTGCACGATCCTACATCCAGTCACTTCCGCCTATGAAGGGACGAA
GTTTTAGAAATGTTTTTCACAACGCAATCCGCTGGCCATTGATTTGCTGG
AAAGATGTTGGAGCTATATGCCGAAAGCGATCACAGCCGATGAGGATCAT
TTCCATCATATCTTGAGAAGTATGCGAGCCACGTCGAGCTGACTCACCAC
ATACGATCAAGCGTCGAGAAATGCATTGCCCGTGACGATGAATGTATTGA
TCTAGAGAAGTCACACTTTAAGCACCCACCGATCGATTGACTCAGATTCA
AGATGTCATGCTGCTTTCTTAAACATTCTCGCGCGAGGCCCGGCTACGGT
CTAACTATGCTATCTAATCAATCACAGGCTGAGAAATCATGTCCTGACAT
ACTGGCCTGGGATGCTCTC
FMO03981.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:40:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| p38a-RC | 1474 | CG5475-RC | 187..1254 | 36..1080 | 4020 | 93.1 | Plus |
| p38a-RB | 1634 | CG5475-RB | 347..1414 | 36..1080 | 4020 | 93.1 | Plus |
| p38a-RA | 1450 | CG5475-RA | 163..1230 | 36..1080 | 4020 | 93.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:40:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24150755..24151703 | 976..36 | 3735 | 94.6 | Minus |
| 2L | 23513712 | 2L | 13781024..13781734 | 64..772 | 890 | 75.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:40:19 has no hits.
FMO03981.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:53:30 Download gff for
FMO03981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mpk2-RA | 157..1139 | 29..1000 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:18:38 Download gff for
FMO03981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mpk2-RB | 393..1375 | 29..1000 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:19 Download gff for
FMO03981.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p38a-RA | 157..1139 | 29..1000 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed on 2014-11-28 23:15:19 has no hits.
Sim4 to na_arms.dmel.RELEASE5 performed on 2013-08-05 00:53:30 has no hits.
