FMO03985.5prime Sequence
556 bp (556 high quality bases) assembled on 2008-07-21
> FMO03985.5prime
CATATATAATACGAAGTTATCAGTCGACATGGGTAACGAGACCTCCCTGC
CCATGGACATGTGTTCCAACTTCGATGCGGACGAGATCCGTAGGCTGGGC
AAGCGATTCCGCAAGCTGGATCTGGACAACTCGGGTGCGCTGAGCATAGA
TGAGTTCATGTCGCTGCCGGAATTGCAGCAGAATCCGCTGGTGCAGCGGG
TTATCGATATCTTCGATGCGGATGGAAACGGGGAGGTGGACTTCAAGGAG
TTTATCCAGGGAGTGTCGCAGTTTAGCGTGCGCGGCGATAAGCTGTCCAA
GCTGCGATTCGCCTTCCGCATCTATGATATGGACAATGATGGCTACATCT
CGAACGGGGAACTCTTCCAGGTGCTCAAGATGATGGTGGGCAACAATCTG
AAGGACACACAGCTGCAGCAGATCGTGGACAAGACCATTTGCTTTGCGGA
CAAGGACGAGGATGGCAAGATATCGTTCGATGAATTCTGCTCGGTGGTGG
GCAATACCGATATTCACAAGAAAATGGTTGTCGATGTTGCAAGCTTTCTA
GACCAT
FMO03985.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:09:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CanB-RB | 1148 | CG4209-RB | 103..613 | 28..538 | 2555 | 100 | Plus |
| CanB-RA | 1214 | CG4209-RA | 169..679 | 28..538 | 2555 | 100 | Plus |
| CanB2-RB | 2061 | CG11217-RB | 257..765 | 29..537 | 1405 | 85.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:09:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5333404..5333914 | 28..538 | 2555 | 100 | Plus |
| 2R | 25286936 | 2R | 7787234..7787533 | 72..371 | 825 | 85 | Plus |
| 2R | 25286936 | 2R | 7787597..7787757 | 377..537 | 490 | 87 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:09:42 has no hits.
FMO03985.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:57:42 Download gff for
FMO03985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CanB-RA | 162..685 | 22..546 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:21:16 Download gff for
FMO03985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CanB-RA | 159..682 | 22..546 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:40 Download gff for
FMO03985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CanB-RA | 162..685 | 22..546 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:40 Download gff for
FMO03985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5333397..5333920 | 22..546 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:57:42 Download gff for
FMO03985.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5227430..5227953 | 22..546 | 98 | | Plus |
