Clone FMO03986 Report

Search the DGRC for FMO03986

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:39
Well:86
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14407-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03986.5prime Sequence

532 bp (532 high quality bases) assembled on 2008-07-21

> FMO03986.5prime
TTCGTATAGCATACATAATACGAAGTTATCAGTCGACATGAACCGAATTT
GCCAGAGTCTCCGCCATCCGAGATACCAGATTCTCGCCACCACAGCACCG
CAATCCCTGCTCACCCGCTTTCTTGCGGCGGATGCGGCCACCGGCGCGGC
AGTGGACAAGGCGACAATGGACAAGCTGGTGCGCACCAACAAGGTGGTCG
TCTTCATGAAGGGCAACCCACAGGCGCCACGCTGCGGCTTCAGCAATGCG
GTGGTGCAGATTATGCGGATGCACGGTGTCCAGTACGATGCCCACGATGT
GCTGCAAAACGAGTCCCTGCGACAGGGTGTCAAGGACTACACCGACTGGC
CGACCATTCCGCAGGTGTTCATCAATGGCGAATTTGTCGGCGGTTGCGAC
ATCCTGCTGCAGATGCACCAGAGCGGCGATCTCATCGAGGAGCTCAAGAA
GGCGGGCATCATTTCGGAGCTGCTGAAAGCGGAGGAGGCTAAGCAGCAGG
ACGACAAGGCTAAGGCAAGCTTTCTAGACCAT

FMO03986.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:56:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14407-RA 668 CG14407-RA 97..573 38..514 2385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:56:29
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 14837811..14838102 329..38 1460 100 Minus
X 23542271 X 14837566..14837754 514..326 945 100 Minus
Blast to na_te.dros performed on 2014-11-28 22:56:30 has no hits.

FMO03986.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:58 Download gff for FMO03986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14407-RA 91..581 32..522 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:31:04 Download gff for FMO03986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14407-RA 90..580 32..522 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:44:54 Download gff for FMO03986.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14407-RA 91..581 32..522 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:44:54 Download gff for FMO03986.5prime
Subject Subject Range Query Range Percent Splice Strand
X 14837558..14837753 327..522 97 <- Minus
X 14837814..14838108 32..326 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:58 Download gff for FMO03986.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 14731591..14731786 327..522 97 <- Minus
arm_X 14731847..14732141 32..326 99   Minus