FMO03989.5prime Sequence
696 bp (696 high quality bases) assembled on 2008-07-21
> FMO03989.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGTTTTACCT
GTTGGTGATTGCAGCCCTCTCGTTTTTGGCCTACATCAGTTGTGATGGAT
GCATCCAGTGCAATTCGAAGGACAACGAACGCTGCGCCACAGATCCATTG
AGCCTGCTCAATCGCAACTGTTCCGATGGATCCTCCAACTGCTATTCCCG
CGTCCTGGATGGCTACACAATTCGCGGCTGTGCCGTCGATCTGGACAACG
CCACGCGTAATTCGTGCAACAACGAGCTACTGTGCCAGCTGTGCACCTAC
AGCGAGGGATGCAATCGAAACACCTTCCCGTTGAGCCGCCTCATGTGCCT
ACAGTGCACAGGGAACTCGACCTCGTCGTCCTGCGCCACAGAGACCTATG
TATCGGCCAAGATCTGCCCGCTGTACAAGTTCGGCGACAAGTGCTACATT
CGCAATAGCAATCGCACCGTGGACGGATCCTTCCAGCGCGGCTGTCTCAC
CTCGGCGAATGCCAGGAAGCAGTGCGTCAAGGATGGCAACTGTTATACGT
GCGAGGGACGCGGCTGCAACTTTCTGCTGGCCAATGATACCAACATTCCG
CTGGCACGCGACAGCGGTGCCCAGTTGATCATCTCCATGACGCTGCTGAT
CAGCGGTCTTGTCGCCGCCTGGAGACTCGCAAGCTTTCTAGACCAT
FMO03989.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:10:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15347-RA | 923 | CG15347-RA | 75..717 | 36..678 | 3215 | 100 | Plus |
| CG15347-RB | 968 | CG15347-RB | 178..762 | 94..678 | 2925 | 100 | Plus |
| CG15347-RB | 968 | CG15347-RB | 75..133 | 36..94 | 295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:10:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8458700..8459170 | 678..208 | 2355 | 100 | Minus |
| X | 23542271 | X | 8459224..8459338 | 208..94 | 575 | 100 | Minus |
| X | 23542271 | X | 8460766..8460824 | 94..36 | 295 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:10:25 has no hits.
FMO03989.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:05 Download gff for
FMO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15347-RA | 65..721 | 23..683 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:31:07 Download gff for
FMO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15347-RA | 61..717 | 23..683 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:03 Download gff for
FMO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15347-RA | 65..721 | 23..683 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:03 Download gff for
FMO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8458696..8459169 | 209..683 | 99 | <- | Minus |
| X | 8459224..8459337 | 95..208 | 100 | <- | Minus |
| X | 8460766..8460834 | 23..94 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:05 Download gff for
FMO03989.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8352729..8353202 | 209..683 | 99 | <- | Minus |
| arm_X | 8353257..8353370 | 95..208 | 100 | <- | Minus |
| arm_X | 8354799..8354867 | 23..94 | 95 | | Minus |
