FMO03994.5prime Sequence
1237 bp (1024 high quality bases) assembled on 2008-07-21
> FMO03994.5prime
CGTATAGCATACATAATACGAAGTTATCAGTCGACATGTCTCCGCACGGA
CGTCCTGGTTGGGAATGGAGCTACCTCCTGCTCACCCTGGCCGTGGGATT
CGCATCCACCCACGGGTGGATGGCCCACTTTCGCCCAGCTGCGCTCACGT
TGCAGATGGAGCGCGGGGATCGGGTGCAGCTCAAGCTGGAGAATGTGGCA
CCTTCCACGCTGCAGCAGCCGACGCGTTACCACTTCCGCCTGGAAAGTGT
GGACACGGATTTGGCCAGTGTTCCAGGCGAGAATGCCACGATATCCCTGG
ATGTATTCAACACGGACACACGCGACTGGACGGGTGACATCGTAGTTAAT
GGCCATTTTCTGGGACAGACCAAGATCCAAGTGAAGCTGTACGACAGCCA
GCGAAACACCAGTGAACTGCCCACCAATTGGAGCAACGACAGCACGCTGG
ACGTGAAGATCAAGCGACCGAAACGTGTGGTGGATGACATATTCCTGGGT
ACGATCATACTACTAATGTCGCTGCTGTACATCAGCTTTGGAGCCGCCCT
AAATCTGGACGTGCTGAGGGGTCTGATCACCCGGCCAACCGGCCCGTGCA
TCGGATTTGTGATGCAGGTGGTGGGCATGCCTCTGCTCAGCTACGCCCTC
GGCGTCTTCATCTTCCCCCAGGCGCCGGCCATGCAGCTGGGTCTCTTCTT
CACCGGCATCTCGCCCAGCGGTGGGGCATCGAACACCTGGTCTGCCGTTC
TCGGCGGTAATATACACCTCTCGGTGCTAATGACCACCGTTTCTAATGTT
GCTGCCTTCGCCACCATACCGCTGTGGACCATAACACTTGGCCAGCTGAT
CTTCGAGCGAGCGGGCATCAAGGTGCCTTACGGCAAAATCGCCTCGTAAC
AGCAGCAGCCTGGTCCTTCCGCTCCTGCTCGGGCTGCTCGTCCAGAGAGA
TGCCTCAGGTCGCTAGGGTGCTGGTTCCGCCTGCTCAAGCCCGTCTCGCC
TTCATCATCTGTCATCATCGTGTTCGCGATCATCACACTTTACCTGTCTA
TTTTGTTCTCCTTGGCGAATCGTCGTCGCTGGCAATGCTCTGCCTGGACT
GGACTACATCCTTCCCTTCCTTGGCAACCAGCTGCTGACACAAATGGAAC
CCGAGCCCTTGAACATCGCCATCGGAACCTATCCAAAACGCAATCGCCAT
CTTCTGCTGTGTGGACAACACTGCTGTAGATATGTCT
FMO03994.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11655-RA | 1720 | CG11655-RA | 105..1248 | 36..1174 | 5055 | 97.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:17:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15453575..15454577 | 36..1035 | 4680 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:17:58 has no hits.
FMO03994.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:46:53 Download gff for
FMO03994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11655-RA | 105..1184 | 36..1110 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:34:07 Download gff for
FMO03994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11655-RA | 91..1170 | 36..1110 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:05:46 Download gff for
FMO03994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11655-RA | 105..1184 | 36..1110 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:05:46 Download gff for
FMO03994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15453568..15454612 | 28..1068 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:46:53 Download gff for
FMO03994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15347601..15348645 | 28..1068 | 98 | -> | Plus |
