FMO04014.5prime Sequence
586 bp (586 high quality bases) assembled on 2008-08-11
> FMO04014.5prime
GTTATCAGTCGACATGAGAATTAATTGCAACGCGCTTTTCCTGGCATCGC
TAGTGACTTGGTCGGGGGTGATGTGCAGCACGGTACTGGGCACCACAGAA
GGCCAGGAAACACCTTTGGCCCTTCCTGTGGCGGAGCAGACGCAGCCCAC
TACAGCCATACAAGGAGAAGTATGGGAGGAGGACGATCACGAAGTGCTTA
TAAGAAATGAACGTGGCACCAAGAGCGACGGTCTGTCTTGTCGATATGGC
AAAAATCCGTGGACTGAGTGTGACACCAAAACCAATACGCGTTCAAGAAC
ATTGACATTAAAGAAGGGCGACCCGGCATGCGACCAAACGCGAACCATTC
AGAAGAAATGTAAAAAAGCCTGTCGATATGAAAAGGGATCTTGGTCGGAA
TGTGCAACCGGACAAATGACTAGAGCTGATAAGTTGAAAGCGAGCAGTGA
TCCGTCCTGCGAAGCCACGCGGGTCATCAAGAAGAACTGCAAGCCCGGAA
AGTCCAAGGACAAAAGTGCCAAGGAGCAGCGGAAGAACAAAGATAAAGCT
GCTCGCAAAGGACGCGTTGCAAGCTTTCTAGACCAT
FMO04014.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:38:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| miple-RC | 1891 | CG1221-RC | 116..671 | 13..568 | 2780 | 100 | Plus |
| miple-RB | 1888 | CG1221-RB | 113..668 | 13..568 | 2780 | 100 | Plus |
| miple-RA | 1904 | CG1221-RA | 129..684 | 13..568 | 2780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:38:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 268242..268461 | 13..232 | 1100 | 100 | Plus |
| 3L | 28110227 | 3L | 268779..268960 | 367..548 | 910 | 100 | Plus |
| 3L | 28110227 | 3L | 268562..268700 | 230..368 | 695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:38:41 has no hits.
FMO04014.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:30 Download gff for
FMO04014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| miple-RA | 121..688 | 7..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:44 Download gff for
FMO04014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| miple-RA | 121..688 | 7..573 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:21:04 Download gff for
FMO04014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| miple-RA | 121..688 | 7..573 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:21:04 Download gff for
FMO04014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 268234..268459 | 7..230 | 99 | -> | Plus |
| 3L | 268563..268700 | 231..368 | 100 | -> | Plus |
| 3L | 268781..268960 | 369..548 | 100 | -> | Plus |
| 3L | 269097..269120 | 549..573 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:30 Download gff for
FMO04014.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 268234..268459 | 7..230 | 99 | -> | Plus |
| arm_3L | 268563..268700 | 231..368 | 100 | -> | Plus |
| arm_3L | 268781..268960 | 369..548 | 100 | -> | Plus |
| arm_3L | 269097..269120 | 549..573 | 92 | | Plus |
