FMO04015.5prime Sequence
490 bp (490 high quality bases) assembled on 2008-08-11
> FMO04015.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGCCTTCTTACGAACTAG
CACTGGTGCTCCGCCAATTGCCTCGCCCCGAACTGATTTCCGTGATTAGG
CGAACGGCCGAGTCCATCCTGGACAAGGGCGGCATTATCCGGAAGCTGGA
GAACCTGGGATCCCGCGCCCTGCCCCACAAAGTCAGCGAACACGGGGTGG
TTCACCGGGAAGGCACCCACTTCACCATCGCCTTTGATACGGCGCCCACT
AAGATCGCAGACTTGAAGGAGGAGTTTGGCCGCGACATCGACATCATACG
GCGCTACATCTTCAAGGTGGAGGAGCCCGAGCAGAAGCCCTGCACGCTGC
ACGAGGAGATGCTGCCACCCGCGTATCGCAAGGATGTGCAGGAGATCATT
GCGGCCGCCCAGAAGAAGCAAAAGAAGAAGTTCAACTACAACTCCGGCCT
GGACTACTATCCCTTCCAAAAAGCAAGCTTTCTAGACCAT
FMO04015.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:29:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpS6-RB | 628 | CG15016-RB | 152..592 | 32..472 | 2205 | 100 | Plus |
| mRpS6-RA | 535 | CG15016-RA | 59..499 | 32..472 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:29:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 4364812..4365207 | 77..472 | 1980 | 100 | Plus |
| 3L | 28110227 | 3L | 4364701..4364745 | 32..76 | 225 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:29:04 has no hits.
FMO04015.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:22 Download gff for
FMO04015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS6-RA | 53..502 | 26..476 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:11 Download gff for
FMO04015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS6-RA | 141..590 | 26..476 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:50 Download gff for
FMO04015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpS6-RA | 53..502 | 26..476 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:50 Download gff for
FMO04015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 4364695..4364745 | 26..76 | 96 | -> | Plus |
| 3L | 4364812..4365210 | 77..476 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:22 Download gff for
FMO04015.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 4364695..4364745 | 26..76 | 96 | -> | Plus |
| arm_3L | 4364812..4365210 | 77..476 | 99 | | Plus |
