FMO04021.5prime Sequence
571 bp (571 high quality bases) assembled on 2008-08-11
> FMO04021.5prime
TAGCATACATTATACGAAGTTATCAATCGACATGGCGGAGTTCCAGTGGC
CCTGGGAGTACACCTTCCCACCCTTCTTTACACTACAGCCCCACGAAGAA
ACCAGACAGCAGCAGCTGAAGGTCTGGACAGATCTCTTTCTCAAATACCT
CAGGCACACGAATAGGTTTACTCTCAGCATTGGGGACCAGAACTCGCCGC
TGTTCCACAACGAAGCGCTGAAGCGCCGCCTCTCGCCGGAACTCGTCCTG
GCCATTCTGGGCGAGCTGGAGCGGAGCGGGCATGCGAATCCGCTGGACAA
GCGACGCCAGGAGTGGCAGGTGTACTGGTTCACCCTCGAGGAATACGGCA
ACATGGTGTACGACTGGGTGCAGGAAACGGGCCAGACGAACACCATCTGC
ACGCTGTACGAAATAGCCTCCGGCGAGAACACCTCTCACCTGGACTTTTA
CGGCGTGGACGAGGCGGTGCTGCTCAGTGCCCTCCGGTTGCTGGAGGAAA
AGGGCAGGTGTGAGCTGATCGAGATGGACGGCAGCCACGGCGTTAAGTTC
TTCACAAGCTTTCTAGACCAT
FMO04021.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vps25-RA | 678 | CG14750-RA | 75..597 | 31..553 | 2600 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8625628..8626099 | 82..553 | 2345 | 99.8 | Plus |
| 2R | 25286936 | 2R | 8625525..8625575 | 31..81 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:25:35 has no hits.
FMO04021.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:36 Download gff for
FMO04021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps25-RA | 65..605 | 18..563 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:46 Download gff for
FMO04021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps25-RA | 65..605 | 18..563 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:43 Download gff for
FMO04021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vps25-RA | 65..605 | 18..563 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:43 Download gff for
FMO04021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8625515..8625575 | 18..81 | 92 | -> | Plus |
| 2R | 8625628..8626102 | 82..555 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:36 Download gff for
FMO04021.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4513020..4513080 | 18..81 | 92 | -> | Plus |
| arm_2R | 4513133..4513607 | 82..555 | 99 | -> | Plus |
