FMO04024.5prime Sequence
393 bp (163 high quality bases) assembled on 2008-08-11
> FMO04024.5prime
GGACACAGGTGGCTCTTGGTTTGGATGACGGTGCTGCTCCTGGTCGTCCC
ACCGCATCTGGTCGACGGCCGTTACCTGCCGACAAGGTCGCATGGCGACG
ATTTGGACTAGTTGCGTGAACTGATGCTGCATATTTTGGAGTTGAGCTAT
GAGGACCCACAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAACACCCACA
GCTGCGTCTCCACAATGAGGCCACCGGTGGCAGCAGCAGCAGCAGCAACA
TCAACAATCCACGCGTGTCCAACGGCAACTCTAATGCCGCCTGGCTGCAA
AAACTGAGTGCCATGGGTGCCCTGGACGAGTTGGGCGGAGATGGAGCCCG
GTTCGGGCCCAACTATGGGCGTTATGCAAGCTTTCTAGACCAT
FMO04024.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:58:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Proc-RB | 1886 | CG7105-RB | 247..621 | 1..375 | 1815 | 98.9 | Plus |
| Proc-RA | 1977 | CG7105-RA | 338..712 | 1..375 | 1815 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:58:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7865907..7866154 | 375..128 | 1195 | 98.8 | Minus |
| 2L | 23513712 | 2L | 7870268..7870398 | 131..1 | 640 | 99.2 | Minus |
Blast to na_te.dros performed 2014-11-28 18:58:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2587..2673 | 179..264 | 171 | 67.8 | Plus |
FMO04024.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:58 Download gff for
FMO04024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Proct-RA | 338..722 | 1..386 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:43 Download gff for
FMO04024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Proct-RA | 338..722 | 1..386 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:35:14 Download gff for
FMO04024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Proc-RA | 338..722 | 1..386 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:35:14 Download gff for
FMO04024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7865897..7866149 | 133..386 | 97 | <- | Minus |
| 2L | 7870267..7870398 | 1..132 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:58 Download gff for
FMO04024.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7865897..7866149 | 133..386 | 97 | <- | Minus |
| arm_2L | 7870267..7870398 | 1..132 | 98 | | Minus |
