FMO04032.5prime Sequence
503 bp (503 high quality bases) assembled on 2008-08-11
> FMO04032.5prime
GCATACATTATACGAAGTTATCAGTCGACATGAGAGCTGCGCCATTCGGA
TCGTGGTACTGGCTGGGATTGGGATTGGGCCTGCTTCTGGCCATCGAGTG
CGGCGTGGTTTCCGCCAAGCGTTTCCTGCGCTGTGAACTGGCCCGCAAGT
TGCTCGATCAGCATGGTTTCGAACGCAGTCTGCTCTCGAATTGGATTTGT
TTGCTAGAGCACGAAAGCGATCTGGATACCGGCAGGATTACAACCAATGC
GAATGGATCTCGGAACTATGGGCTGTTCCAAATCAATGGCAGGTTTTGTC
AGGAGGGAAGGCGTGGCGGCATTTGCAATGCCAAGTGCGAAGATTTTTTG
GACGAAAATTTAAGGGAGTCGGTTACTTGCGCCAAGCGCATCCAAACCTC
GGATGGTTTTCGTCATTGGGCGGGATGGCAACGATATTGCCGAAACGCCC
AAAATCTGCCTAATCTTAAGGTTATCTGTGGGATCGCAAGCTTTCTAGAC
CAT
FMO04032.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16756-RA | 521 | CG16756-RA | 12..467 | 30..485 | 2265 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:24:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 5427528..5427691 | 30..193 | 820 | 100 | Plus |
| X | 23542271 | X | 5427806..5427959 | 193..346 | 755 | 99.4 | Plus |
| X | 23542271 | X | 5428019..5428163 | 341..485 | 710 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:24:59 has no hits.
FMO04032.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:30:34 Download gff for
FMO04032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16756-RA | 2..467 | 22..485 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:25 Download gff for
FMO04032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16756-RA | 2..467 | 22..485 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:18 Download gff for
FMO04032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16756-RA | 2..467 | 22..485 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:18 Download gff for
FMO04032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 5427517..5427690 | 21..192 | 97 | -> | Plus |
| X | 5427806..5427955 | 193..342 | 100 | -> | Plus |
| X | 5428021..5428163 | 343..485 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:30:34 Download gff for
FMO04032.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 5321550..5321723 | 21..192 | 97 | -> | Plus |
| arm_X | 5321839..5321988 | 193..342 | 100 | -> | Plus |
| arm_X | 5322054..5322196 | 343..485 | 99 | | Plus |
