Clone FMO04033 Report

Search the DGRC for FMO04033

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:40
Well:33
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG17244-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04033.5prime Sequence

433 bp (433 high quality bases) assembled on 2008-08-11

> FMO04033.5prime
TCTGGGCAGAATTTTCCACAGGGAGTCCACCTCCACAACAACCAGCACAA
CTACGACGACCACAGAGGAGCCCCGCCGACCCTTCTACATCAACAACAAT
ATTCCCGAAATCCCGAAGGACTGTGTGGCGCAGTTCAAGTGCAAAAAGAA
GCTGGCGAATGTTCAGGCTCCAAAACCGTGTGTGAAATACTGCCTGCACA
GGATCACCTGTCCCAATAACCAGACCAGTCCCGTTCAACCCAACCAGTGT
GTCGATCTCGACGAGCAACAGGTGCTGGCCGTCCACGAGGCAAACACGGA
GCCTCCGGTCGCCGGCCAAACCACCACCGAGAAGACCATGATGGTGGCCA
TGATCGACTTCCCCTGCCAGCCCGGCTATCTGCCCGACCATCGTGGTCGC
TGCCGGGAAATCTGGGCAAGCTTTCTAGACCAT

FMO04033.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG17244-RB 895 CG17244-RB 101..515 1..415 2045 99.5 Plus
CG17244-RA 633 CG17244-RA 101..515 1..415 2045 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22977370..22977784 1..415 2045 99.5 Plus
Blast to na_te.dros performed on 2014-11-28 22:12:07 has no hits.

FMO04033.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:17 Download gff for FMO04033.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17244-RA 101..515 1..415 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:25 Download gff for FMO04033.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17244-RA 100..514 1..415 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:07:49 Download gff for FMO04033.5prime
Subject Subject Range Query Range Percent Splice Strand
CG17244-RA 101..515 1..415 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:07:49 Download gff for FMO04033.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 22977370..22977784 1..415 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:17 Download gff for FMO04033.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18803092..18803506 1..415 99   Plus