FMO04035.5prime Sequence
524 bp (524 high quality bases) assembled on 2008-08-11
> FMO04035.5prime
CTTATACGAAGTTATCAATCGACATGGCGCTGCGCATCCTGAAAACAGTT
AGACAAGTGGCCCAACCACTGGCGGTAACCCTGGGCGGCCAGCAAACACA
GCAATTGATTCACACAACGCCGGCGTGCTGCGAAATCCGGAAATTGGCCC
GGTTACGGGTGGTGGACAACAGCGATTTGGGAAAGAAAGCGATGGCCGAG
GGGCGACCACCGAGGTGCATCCATGTCTACAACAAACGCGGAGTCGGCTT
CATTGGCGATAAGGTGCTGGTGGCCATCAAGGGACAGATGAAGAAGGGCA
TTCTCGTGGGACTCAAGCAGAACCAGAAGCCCAAACAGCCAAAATTCGAT
AGCAACAACCTGGTGCTCATCGACGACAATGGCAGTCCGCTGGGCACTCG
CATCCATGTGCCCATTCCCACGATCCTGCGAACCATCCTCAAGGAGAAGA
CGCTGGCCAAAGGAGCCGATTACACCAAGGTTCTGGCCATCGCCAGCAGA
TATGTTGCAAGCTTTCTAGACCAT
FMO04035.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:06:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL14-RB | 597 | CG14048-RB | 59..541 | 24..506 | 2400 | 99.8 | Plus |
| mRpL14-RA | 653 | CG14048-RA | 115..597 | 24..506 | 2400 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:06:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2344053..2344535 | 506..24 | 2400 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:06:55 has no hits.
FMO04035.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:00 Download gff for
FMO04035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 111..597 | 17..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:23 Download gff for
FMO04035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 99..585 | 17..506 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:36 Download gff for
FMO04035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL14-RA | 111..597 | 17..506 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:36 Download gff for
FMO04035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2344053..2344539 | 17..506 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:00 Download gff for
FMO04035.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2238086..2238572 | 17..506 | 99 | | Minus |
