FMO04036.5prime Sequence
298 bp (148 high quality bases) assembled on 2008-08-11
> FMO04036.5prime
GCCGGCGGCGAATACGGCGGACAAGTTCTCCGCCAACGCGGAGGACTAGA
GGGCTACTATCTGATGCTGGAGGCGGGAAATATTCCGGAACTGCAATGGC
AATTTCCGGGACGCAGGGCTCCATCGCCGGAGGCGGGATCTGGCGGCAAT
AGCAAGGAACTCGAACAGGCCACCGACGCCATTGAGCAGGAACCGCAAAA
GGCCAACGACTTTGATTTCAGCGACGATGTGGCCCCCACCCAGATGCGCG
TCCGCAGCCAGACGTCCACGCCCAAGTCGGCCAAAAAGAAGACGGCCA
FMO04036.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:11:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Pa1-RA | 1628 | CG11750-RA | 111..409 | 1..298 | 1455 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:11:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11359346..11359537 | 1..191 | 910 | 99.5 | Plus |
| X | 23542271 | X | 11359604..11359710 | 192..298 | 520 | 99.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:11:50 has no hits.
FMO04036.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:47 Download gff for
FMO04036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pa1-RA | 111..408 | 1..297 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:35 Download gff for
FMO04036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11750-RA | 110..407 | 1..297 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:38 Download gff for
FMO04036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Pa1-RA | 111..408 | 1..297 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:38 Download gff for
FMO04036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11359346..11359537 | 1..191 | 99 | -> | Plus |
| X | 11359604..11359709 | 192..297 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:47 Download gff for
FMO04036.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11253379..11253570 | 1..191 | 99 | -> | Plus |
| arm_X | 11253637..11253742 | 192..297 | 99 | | Plus |
