FMO04037.5prime Sequence
468 bp (468 high quality bases) assembled on 2008-08-11
> FMO04037.5prime
GAGGCGATACGCGTCTATGGCTCCACCGTGATATCCACGCCCATGAGAGG
CAAGCAAGGTCGCTCCACCGAAGACGTCTCCATCCGGATTCAGGACCCCA
AGGGCTACAACAAGTATGCCGAGGACACAACGTCCCGGGACAGCGACTCG
CTCATCCAGGAGTACGGCAACCTGCCCACGGAGGAGACCAACATATACTG
CTGGCGGCATCCCAAGGTGCGTGAGAACTGGCGCACAGTGCTGGCCGCCT
TTACGCTCCTGGTCGTGGGCACGGGCCTCTTTGTGATGGGCACCTTTGCC
ATCGCGGATCCGCAGAACACGTCGCAGGGAGTCGTGTTCTTCGTAGCGGG
ACTCATCTGCTTCATACCCGGGGCCTATCACGTCGTGTACATCTGGCTGG
CAGCCAAAGGATATCGAGGGTTCGACTTCTATCACCTGCCGCTGTTCACA
GCAAGCTTTCTAGACCAT
FMO04037.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12025-RC | 2839 | CG12025-RC | 388..837 | 1..450 | 2235 | 99.8 | Plus |
| CG12025-RB | 1992 | CG12025-RB | 388..837 | 1..450 | 2235 | 99.8 | Plus |
| CG12025-RA | 1211 | CG12025-RA | 388..837 | 1..450 | 2235 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1867135..1867489 | 96..450 | 1745 | 99.4 | Plus |
| 3L | 28110227 | 3L | 1865817..1865918 | 1..102 | 510 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 19:33:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsil\Loa | 7779 | Dsil\Loa DSV28T24 7779bp AKA(S39346) Derived from X60177 (Rel. 37, Last updated, Version 8). | 3126..3171 | 315..270 | 104 | 69.6 | Minus |
FMO04037.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:44 Download gff for
FMO04037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12025-RA | 388..842 | 1..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:09 Download gff for
FMO04037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12025-RA | 387..841 | 1..456 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:19 Download gff for
FMO04037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12025-RA | 388..842 | 1..456 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:19 Download gff for
FMO04037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1865817..1865917 | 1..101 | 100 | -> | Plus |
| 3L | 1867141..1867494 | 102..456 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:44 Download gff for
FMO04037.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1865817..1865917 | 1..101 | 100 | -> | Plus |
| arm_3L | 1867141..1867494 | 102..456 | 99 | | Plus |
