FMO04038.5prime Sequence
741 bp (741 high quality bases) assembled on 2008-08-11
> FMO04038.5prime
TACCTTATACGAAGTTATCAGTCGACATGGACAAGAAGCATCGCCTCGTG
GTCTACGACTGCGACATTGGGACCGATGATGCCTGGGGATTGGCCATGTT
GCTGCGCGCGGAGGAGCTAACTCTGCGCGAAGGAAGGACCTGCAAAGTGT
TGGCCATAACAACGGTGCATGGCAACACGGATGCGGACAATGGAACACTG
AATGCCCTGCGGGTGCTGCACACGTTGAACAGGCGCGATGTTCCGGTCTT
TAGGGGCTGTTACGAATCCATAGTGCCACGCACTTGGGAGTATACCAACT
GTTTCCATGGCCAGGATGGCCTAAACGATGTGGGCAACTATCCTGTGGTC
GATGTGGAGCAGGAACTGCAACCGGAGCACGCTGTCAATGCCATGTACCG
CCTGGCCAGAGCTAATCCCGGCCAAGTGGACTTTCTGCTGTGCGGACCAC
TTACCAACTTTGCCAACTGCATCAATTTGTATGGAAACTCATTTCTGACG
AACATTGGTCGAGTCTATATAATGGGTGGCAACATATTCGGCAAGGGTAA
TGTCACGAAAAGTGCCGAATTCAATTTCATGATGGATCCCGAGGCGGCGC
ACATTACCCTGGAGCGTCTGCTGGAACCGGCGATCATTCCTGCCCTGGGA
GCCCTGCATCGATGGAGAGTTCGACACCACCCTCGACTGGCGACTGAATG
TCCTCGGAGCGGTTGATCATCCCTTTATAAAGCTACTCACA
FMO04038.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:13:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11158-RA | 1608 | CG11158-RA | 20..738 | 22..741 | 3560 | 99.7 | Plus |
| CG5418-RA | 1196 | CG5418-RA | 352..664 | 351..664 | 280 | 73.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:13:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13683246..13683746 | 240..741 | 2445 | 99.6 | Plus |
| X | 23542271 | X | 13682971..13683190 | 22..241 | 1100 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:13:30 has no hits.
FMO04038.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:06 Download gff for
FMO04038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11158-RA | 11..737 | 11..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:36 Download gff for
FMO04038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11158-RA | 56..782 | 11..740 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:51:32 Download gff for
FMO04038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11158-RA | 11..737 | 11..740 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:51:32 Download gff for
FMO04038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13682962..13683188 | 11..239 | 98 | -> | Plus |
| X | 13683246..13683745 | 240..740 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:06 Download gff for
FMO04038.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13576995..13577221 | 11..239 | 98 | -> | Plus |
| arm_X | 13577279..13577778 | 240..740 | 99 | | Plus |
