Clone FMO04042 Report

Search the DGRC for FMO04042

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:40
Well:42
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG7714-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04042.5prime Sequence

726 bp (726 high quality bases) assembled on 2008-08-11

> FMO04042.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGAAAGCCGTGATCTT
TGTGCTCGCCGTCGTGGTAGCCATGGCCGGAAAAGCCCACGCCGCATGCT
CCGCCGTTCCTCAATATACGGAAAAGATCGATCCTGTCAATTGCCCACAG
TCAGGATTCAAGTTGCCCAACTATGAGAACGCCTCCGTGTACTACCAGTG
CACCGCACAGTTACAGTCCGATGGCAGCATAGTGGTGACTGGCGTCTTGA
CCAGCTGCGGTGAAGACACCTACTTCAACTATGCCTTGCAGAGATGCGTG
GCCTGCGCCAATTACTTCCCAAGCGCCCAGTGCAGCAGTCTGCCCATCAA
TGTGACCTGTGTGCCCATCTCCACCGTTACCACTGTGGCCCCCACAACCG
GAACCACCATTGCTCCCACCACCGCGTCCCCCACTACCGCTGCTTCCACC
ACTGCGGCACCTGGCGAGTCCACCACTGCAGCACCTGGCGAGTCTACCAC
CGTCACGGTGCCCGTACCACCAACTGAAGCTCCTGGCAGCACCACGGCCT
CCGGCAGTGACGACATCATTACCCCGACTGGTACCACCATCTCCGTGCCC
CAGCCCCCCTCACCCAGTGACAGCAACGTGCCCACTCCGGTGACGCCCGC
GCCCACAGCTCCTGTCATCAACGACGGTCCTCCGACCGCACCTTCGGCTG
CCACCAAAGCAAGCTTTCTAGACCAT

FMO04042.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:33:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG7714-RA 953 CG7714-RA 81..757 32..708 3385 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:33:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 18725595..18726260 708..43 3330 100 Minus
Blast to na_te.dros performed on 2014-11-28 19:33:38 has no hits.

FMO04042.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:58 Download gff for FMO04042.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7714-RA 76..765 26..719 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:26 Download gff for FMO04042.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7714-RA 76..765 26..719 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:22:32 Download gff for FMO04042.5prime
Subject Subject Range Query Range Percent Splice Strand
CG7714-RA 76..765 26..719 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:22:32 Download gff for FMO04042.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 18725587..18726263 37..719 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:58 Download gff for FMO04042.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 14551309..14551985 37..719 98   Minus