FMO04047.5prime Sequence
742 bp (742 high quality bases) assembled on 2008-08-11
> FMO04047.5prime
ATACATTATACGAAGTTATCAGTCGACATGTCTCAGCCCAAGCCGATTTT
GTATTACGACGAGCGCAGTCCGCCGGTCCGCAGTTGCCTTATGCTAATCA
AATTGCTCGATATAGATGTGGAGCTCAGGTTTGTGAATCTCTTCAAGGGC
GAGCAATTCCAAAAAGATTTCTTAGCGTTAAATCCCCAGCACAGTGTTCC
CACCCTAGTCCACGGTGATCTGGTGCTGACGGACAGTCATGCTATACTCA
TTCACCTGGCGGAGAAGTTCGATGAGGGCGGTAGTTTGTGGCCGCAGGAG
CACGCAGAACGGATGAAGGTTCTGAACCTCCTGCTCTTCGAGTGCTCCTT
TTTGTTCCGACGTGACAGTGATTTTATGTCGGCGACTGTCCGCCAGGGAT
TCGCCAATGTCGATGTGGCACATCATGAACGCAAGCTGACCGAGGCGTAT
ATTATCATGGAGCGTTACCTGGAAAATAGCGATTTTATGGCCGGGCCACA
GCTGACGCTCGCCGACTTATCCATCGTGACCACATTGAGCACCGTCAATC
TCATGTTTCCCCTGTCGCAGTTCCCACGTCTGCGGCGCTGGTTCACCGCG
ATGCAGCAGCTGGATGCCTACGAGGCCAACTGCAGTGGCTTGGAGAAGCT
CCGCCAAACGATGGAGAGCGTCGGTAGCTTTCAGTTCCCCATCGTCATCA
GCGGTAGTCACCGAGAAGGTGGAGGCAAGCTTTCTAGACCAT
FMO04047.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
GstE14-RA | 1008 | CG4688-RA | 60..755 | 28..724 | 3460 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 13240536..13240760 | 499..724 | 1080 | 99.6 | Plus |
2R | 25286936 | 2R | 13240064..13240265 | 177..378 | 1010 | 100 | Plus |
2R | 25286936 | 2R | 13239788..13239941 | 28..181 | 755 | 99.4 | Plus |
2R | 25286936 | 2R | 13240323..13240446 | 378..501 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:07:02 has no hits.
FMO04047.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:03 Download gff for
FMO04047.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE14-RA | 60..759 | 28..730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:26 Download gff for
FMO04047.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4688-RA | 61..760 | 28..730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:40 Download gff for
FMO04047.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
GstE14-RA | 60..759 | 28..730 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:40 Download gff for
FMO04047.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 13240539..13240764 | 502..730 | 98 | | Plus |
2R | 13240065..13240265 | 178..378 | 100 | -> | Plus |
2R | 13240324..13240446 | 379..501 | 100 | -> | Plus |
2R | 13239788..13239937 | 28..177 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:03 Download gff for
FMO04047.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 9127293..9127442 | 28..177 | 100 | -> | Plus |
arm_2R | 9127570..9127770 | 178..378 | 100 | -> | Plus |
arm_2R | 9127829..9127951 | 379..501 | 100 | -> | Plus |
arm_2R | 9128044..9128269 | 502..730 | 98 | | Plus |