FMO04048.5prime Sequence
485 bp (485 high quality bases) assembled on 2008-08-11
> FMO04048.5prime
ATAGCATACATTATACGAAGTTATCAGTCGACATGCCAAAGTACTATTGC
GACTACTGCGACACCTACTTGACCCACGACTCGCCCTCGGTGCGGAAAAC
CCACTGCACCGGCCGCAAGCATCGCGACAATGTAAAGTTCTACTACCAAA
AGTGGATGGAGGAACAGGCGCAGCATTTGATTGACGCCACTACCGCCGCC
TTCAAAGCGGGCAAGATCACGAACAATCCGTTTGCCGGCGGGCCAGGAGG
AGCGCCTCCCAAGCCGGCGGGCGTGTCTATTCCGCCGCCCAACATGGGGG
CTCCTCCGCGTCCGGGAATGCCTGGAATGCCCTATATGCCTCCACTGATG
AACCCCATGATGGGCATGCGTCCGCCACCGATTATGAATCCCATGGCCAT
GATGGGACCACCGCCTCCACTGGGCACTATACCCGGCGTCCGTCCAGGAA
TCATGAACGGACCCAAGGCAAGCTTTCTAGACCAT
FMO04048.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:33:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| snRNP-U1-C-RA | 687 | CG5454-RA | 111..545 | 33..467 | 2160 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:33:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18983106..18983540 | 467..33 | 2160 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:33:05 has no hits.
FMO04048.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:29:46 Download gff for
FMO04048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snRNP-U1-C-RA | 100..547 | 23..471 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:25 Download gff for
FMO04048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snRNP-U1-RA | 100..547 | 23..471 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:20:57 Download gff for
FMO04048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| snRNP-U1-C-RA | 102..549 | 23..471 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:20:57 Download gff for
FMO04048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18983102..18983549 | 23..471 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:29:46 Download gff for
FMO04048.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14808824..14809271 | 23..471 | 98 | | Minus |
