FMO04052.5prime Sequence
712 bp (462 high quality bases) assembled on 2008-08-11
> FMO04052.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGTCCAAGTATTCGAAGC
TGGCCCGCGGGTTCTGCGACCTGCTGATCTGGGTGGCCCTCAGCGTGGCC
AGTGTGCTGCTCCACAAGATGGGGCGTCCCTTCCGGCGCGGCTTCTTCTG
TGGCGACGAGACCCTCAGCTATCCAGCGCGCGACGGCACCATCAGCTCCA
AGGTGATCATCGCCATCGTCCTCGGAGTGCCCAACGCCGTGATCGTAGTG
GTGGAGTTGTTTAGGCAGCTGCCCGGTGGGCCGCTTAGAGAGGCGGGCGG
TAAGCGGGATAGCTGCCGGATAGCCCACCGCCTCGGGGTCCTTTATCGCC
AGGTTATCTTCTACCTGTACGGCCTCGCCATGGTCACGTTCACCACGATG
CTGACGAAGCTGTGCCTCGGGCGTCTGCGACCGCACTTCCTCGCCGTGTG
CCAGCCCATGCCTCCGGGACGGAAGCAGCCTGCAGGACGCCCAAAAACCT
GGGACGCTACTTAGAACAGTTTAGGCCCACCCACCAACTGACCGATCTCC
AGTTCAAGGACTCACCAGTCCTTCCAAGCGCCAGCCCGATGGCTGTGTAT
CTATGCTCTACTGGTCATCTATCTGCAGGGGGCCTTAATACCCCGGTTCC
ATTAGATTCTGTGTAACTGGTTCCTCTAGTATCGGTGAGAGCTATCGCAT
ACATCAAACTGC
FMO04052.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11438-RB | 2458 | CG11438-RB | 1291..1902 | 31..633 | 2395 | 94.5 | Plus |
| CG11438-RA | 1245 | CG11438-RA | 78..689 | 31..633 | 2395 | 94.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22466909..22467391 | 31..515 | 2220 | 98.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:25:30 has no hits.
FMO04052.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:31 Download gff for
FMO04052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11438-RA | 74..647 | 24..593 | 94 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:38 Download gff for
FMO04052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11438-RA | 74..647 | 24..593 | 94 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:00:40 Download gff for
FMO04052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11438-RA | 74..647 | 24..593 | 94 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:00:40 Download gff for
FMO04052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22466900..22467478 | 25..593 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:31 Download gff for
FMO04052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22460000..22460578 | 25..593 | 94 | | Plus |
