FMO04053.5prime Sequence
454 bp (454 high quality bases) assembled on 2008-08-11
> FMO04053.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCCTGCAACG
AGAAGACAGCGCTTCTGGCAACGCAACAAGGACATCAGCAGCGGCAGCAG
CGGCAGCAGCAGCACATCATTGTCGTGCCCGCGACGGGGAAGGATCCAAA
GGATTATGAGCCCATTTTCACAACTGCTGACTATTCCTACGGACTGACGC
TCGAGGAGCTCCTGCCCTTCGCTCTGGATCCCTGGTGGCAGGCCGTACGG
CGCCTCAGCTGCGGGCTCCTGGGCCTGACTTTCCTGCTGACCCTGATTGC
TGGACTGGTTATGGCCTATTCCGACAGTGTCTGTCTCCCAAATAGAGCAA
TTAGCAGAAACGCGACCACCACGACAACGATGGCCACGCCACTATCCTTG
GCTCTCAATGGCTCCCAGCTGCTGATGGCCAGTTTAGCAAGCTTTCTAGA
CCAT
FMO04053.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:07:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5697-RD | 939 | CG5697-RD | 177..575 | 38..436 | 1980 | 99.7 | Plus |
CG5697-RC | 888 | CG5697-RC | 126..524 | 38..436 | 1980 | 99.7 | Plus |
CG5697-RB | 921 | CG5697-RB | 159..557 | 38..436 | 1980 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:07:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21016501..21016756 | 181..436 | 1265 | 99.6 | Plus |
3R | 32079331 | 3R | 21016285..21016427 | 38..180 | 715 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:07:09 has no hits.
FMO04053.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:03:06 Download gff for
FMO04053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5697-RB | 159..557 | 38..436 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:15:41 Download gff for
FMO04053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5697-RA | 225..623 | 38..436 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:42 Download gff for
FMO04053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5697-RB | 159..557 | 38..436 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:42 Download gff for
FMO04053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21016285..21016427 | 38..180 | 100 | -> | Plus |
3R | 21016501..21016756 | 181..436 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:03:06 Download gff for
FMO04053.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16842007..16842149 | 38..180 | 100 | -> | Plus |
arm_3R | 16842223..16842478 | 181..436 | 99 | | Plus |