FMO04054.5prime Sequence
480 bp (480 high quality bases) assembled on 2008-08-11
> FMO04054.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGATCTTCTCAA
GAGGCACCTGCTGCTCCTGGTCATCGGAGCTTGCCTGTGTGTCTGCGCCC
AGGCCACGATCACCATCCAGAAAACCAAGCCAGCGCTGCCGGATCCCAGC
CAGTTGCTAGCCAAGCTACCGCCAAAGCCGGACTTTCTCAAGGATCCCTC
TAAATTACTAGCCAAAATCGCGCAATCCAAACCAGCTCTCCCAGATCCCA
GCCAGCTGCTCGCCAAACTGCCGCCCAAGCCCGCTATCCTCAAGGATCCC
AGCCAGCTGCTCTCCAAGTTCGTGAAACCAAAGCCAGTGATCATAAAGCC
GGTGATTGTGAAGCCGGTGGTGGTGGTCAAGCCCGTGGCGGTTGGCGGAG
GTGGCGGTGGTCACGGCCACGGACATCATGGACATCATGGACACCATGGC
AAGGGCAAGCTAGCAAGCTTTCTAGACCAT
FMO04054.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11413-RA | 602 | CG11413-RA | 9..435 | 36..462 | 2135 | 100 | Plus |
| CG4622-RC | 2762 | CG4622-RC | 372..798 | 462..36 | 2135 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24536198..24536624 | 36..462 | 2135 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:59:03 has no hits.
FMO04054.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:37 Download gff for
FMO04054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11413-RA | 2..445 | 29..476 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:18 Download gff for
FMO04054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4622-RB | 298..741 | 29..476 | 98 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:14 Download gff for
FMO04054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4622-RC | 362..805 | 29..476 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:14 Download gff for
FMO04054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24536191..24536634 | 29..476 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:37 Download gff for
FMO04054.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20423714..20424157 | 29..476 | 98 | | Plus |
