FMO04056.5prime Sequence
390 bp (390 high quality bases) assembled on 2008-08-11
> FMO04056.5prime
CCTTATACGAAGTTATCAGTCGACATGGCGATTGCGCAGGCGCGCAGGTC
ACTCCTACGCCATGGACGCAGTGGTGGCGGCAAAAAGGGGATTAAGATAT
ATATGATGATTTTCCTGACTAACCACTTTAGATCTTTGGCTACTTGGTTG
TCACCTTACATCCCGTTTTTAATGATCCCCTCTAATATTTTTTGCATTTG
CCACTGCTTGCAAGTGACAAACACAACTGTACCTTCAATGGTGTTCAACT
GTAGTTGTATTTACCGCCGTTATGGTGATTTGTCAGCAATTTTTAGCATG
ATTAATGAATGTTTCAATCCGGCGACACAACTCCCTCTTCCTCCAACCCA
CCGCTTTGTTAGCCGAAATTCTGCAAGCTTTCTAGACCAT
FMO04056.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:15:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16310066..16310413 | 25..372 | 1710 | 99.4 | Plus |
Blast to na_te.dros performed 2014-11-28 19:14:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 2275..2348 | 198..126 | 115 | 63.5 | Minus |
FMO04056.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:00 Download gff for
FMO04056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32160-RA | 881..1233 | 17..372 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:16 Download gff for
FMO04056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16310061..16310413 | 17..372 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:16 Download gff for
FMO04056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16310061..16310413 | 17..372 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:32 Download gff for
FMO04056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16303161..16303513 | 17..372 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:32 Download gff for
FMO04056.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16303161..16303513 | 17..372 | 98 | | Plus |
