Clone FMO04058 Report

Search the DGRC for FMO04058

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:40
Well:58
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG11267-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04058.5prime Sequence

361 bp (361 high quality bases) assembled on 2008-08-11

> FMO04058.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCGCCGCTATCA
AGAAGATCATCCCCATGCTGGACCGCATCCTAATCCAGCGTGCCGAGGCG
CTGACCAAGACGAAAGGAGGCATTGTTTTGCCGGAGAAAGCGGTGGGCAA
AGTACTTGAGGGCACCGTTCTGGCCGTAGGCCCTGGCACCCGTAATGCCT
CCACTGGCAACCACATTCCCATTGGCGTGAAGGAGGGCGATCGTGTTCTG
CTGCCCGAATTCGGTGGCACCAAGGTGAACCTAGAGGGTGACCAGAAGGA
GCTGTTCCTCTTCCGCGAGTCCGACATCCTGGCCAAATTGGAGGCAAGCT
TTCTAGACCAT

FMO04058.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:28:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG11267-RA 594 CG11267-RA 113..421 35..343 1545 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:27:59
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 13016356..13016518 37..199 815 100 Plus
3L 28110227 3L 13016587..13016730 200..343 720 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:28:00 has no hits.

FMO04058.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:05 Download gff for FMO04058.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11267-RA 113..421 35..343 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:59 Download gff for FMO04058.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11267-RA 106..414 35..343 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:15:21 Download gff for FMO04058.5prime
Subject Subject Range Query Range Percent Splice Strand
CG11267-RA 113..421 35..343 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:15:21 Download gff for FMO04058.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 13016346..13016518 25..199 97 -> Plus
3L 13016587..13016730 200..343 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:05 Download gff for FMO04058.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 13009446..13009618 25..199 97 -> Plus
arm_3L 13009687..13009830 200..343 100   Plus