FMO04070.5prime Sequence
833 bp (833 high quality bases) assembled on 2008-07-30
> FMO04070.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCAGCTAACCGGT
GCCTCTATGTTCCTCGTATGGGTGGGTCTACTCAGCTGGGTTTCCTGCAG
AGTGGACGCCTCCGAAGGATTTCCATCGCCGCTGAAGCGCTGCAAGCTCC
AGGATGAGTCGTGCTTGCTGGCTCAGGCGCAAACCTTTTTCCAAGCCTTC
AAGAATGGCATTCCGGAGCGGCAGGTGGCCGCGCTGGAGCCCATTGCCCT
GGGCACGATGTTCATCGAGAGCGGCGGCCACTCGGAGTCGATAAAGTTCA
AACTGACCATGAGCGATGCCAAGCTCTACAATCTGGCCAACTCGATGATG
GTCAAGAGCCTGAAGGGATTCACCAAGGACCTCACCAGGCCGCTCAAGCT
GACCCTGCTCTTGGACAATCCGGAACTGGAGGTGCGGGCCAAGTACGACG
TAGACGGCAAGCTGCTCATCCTGCCCATTGTCAGCAAGGGCGACCTGACC
ATTCGGTTGAACGATGTGCACACAAAGGTTTGGATTACCGCCGAGCCAGT
GAAGCGCTCCGATGGCCACACCTATCTCAACATCACCGACTACAAGACGG
CCACCAAGATCAAGGGTGGCCACTTTGACCTGTCGAATCTGTTCAACGAC
AACAAGGAGCTGCGCGACAGCACGCTGAAGGTGCTGAACCAGGAGTGGAG
CACCCTGGCCCTCGATGTCCAGCCGAAGATCAACGAGGCCTGCGCCAAGG
CCTTCAGTGCCATCGTACAGAGTCTGTGGGCCAACATTCCCTACGACGAG
TTCTTCGAAAAGGAAGCAAGCTTTCTAGACCAT
FMO04070.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:07:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2650-RA | 1013 | CG2650-RA | 67..846 | 36..815 | 3900 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:07:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2693156..2693648 | 616..124 | 2465 | 100 | Minus |
| X | 23542271 | X | 2692899..2693098 | 815..616 | 1000 | 100 | Minus |
| X | 23542271 | X | 2693733..2693820 | 123..36 | 440 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 22:07:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\Tom | 7060 | Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). | 3197..3232 | 797..832 | 117 | 80.6 | Plus |
FMO04070.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:52:03 Download gff for
FMO04070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2650-RA | 67..850 | 36..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:51:46 Download gff for
FMO04070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2650-RA | 67..850 | 36..819 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:50:28 Download gff for
FMO04070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2650-RA | 67..850 | 36..819 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:50:28 Download gff for
FMO04070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2692895..2693097 | 617..819 | 99 | <- | Minus |
| X | 2693156..2693648 | 124..616 | 100 | <- | Minus |
| X | 2693733..2693814 | 42..123 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:52:03 Download gff for
FMO04070.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2586928..2587130 | 617..819 | 99 | <- | Minus |
| arm_X | 2587189..2587681 | 124..616 | 100 | <- | Minus |
| arm_X | 2587766..2587847 | 42..123 | 100 | <- | Minus |
