FMO04071.5prime Sequence
797 bp (797 high quality bases) assembled on 2008-07-30
> FMO04071.5prime
CGTATAGCATACATTTTACGAAGTTATCAGTCGACATGTTGAAGAACATC
TACGTAACGCCGTTAAATTTGCTTAAATCGGCCACCAGCCTGCAGCAGCA
AGTGCGGACCACGTTCGTCCTGAAGCGCAAATATGACCCGCCGCTGCACA
AAACCAACGAGAAACCCCGCCGGATGAGGGCCAAGAACTTCATCTACGAG
CTCGTGGACGACACGCTGGTCAAAAAGCGGCCCAACATCGAGGTGGTGCT
AAAGACCTTCGTCGAGGGCGTTGGCGACAAGGGCGACGTGGTGTCAATGA
AGCCGCACTTTGTCTACAATAAGCTCCTGCTGCCGGGTTTGGCCGCGTAC
AATACGCCGGAGAATGTGGCCAAGTACGCCAAGACAGAGGCTGAAAAATC
GACTGTTAAACACAGCTCCCCCTACGCCCAGCGCACGGTCAACATGCTGG
AGACCATTGTGCTGGCGGTGGTCATGAACAAGGATGAGCCATGGGTGCTC
GAGCCCTGGCACATCAAGGCCTCGCTGCGCAAGACTGGGTTCTATTGTCG
CGAGGAGTGCATTACCCTGCCCAAGGAGCGCATCGAGGGACCCGACCTGA
AGAAGGAGAACAAGGACTTCTACTGCACTGTGACCATAAACAAGCTGGAA
CAGGCGCGACTCAAGTGTCGTCTGCACCACTGGAGCACAGATCCCAGCGA
ACGGCTGCCTTACGTACTCGAGCACTGGAAACTCCAGTCTGAGCCCCTGC
TGGATGTATGTTCACCCGAAAAAACCCCTGCAAGCTTTCTAGACCAT
FMO04071.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL9-RA | 794 | CG31478-RA | 17..760 | 36..779 | 3720 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15330882..15331554 | 107..779 | 3365 | 100 | Plus |
| 3R | 32079331 | 3R | 15330754..15330825 | 36..107 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 21:13:52 has no hits.
FMO04071.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:00:04 Download gff for
FMO04071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL9-RA | 11..760 | 30..779 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-30 14:46:47 Download gff for
FMO04071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL9-RA | 9..758 | 30..779 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:45:59 Download gff for
FMO04071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL9-RA | 11..760 | 30..779 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:45:59 Download gff for
FMO04071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15330748..15330825 | 30..107 | 96 | -> | Plus |
| 3R | 15330883..15331554 | 108..779 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:00:04 Download gff for
FMO04071.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11156470..11156547 | 30..107 | 96 | -> | Plus |
| arm_3R | 11156605..11157276 | 108..779 | 100 | | Plus |
