Clone FMO04075 Report

Search the DGRC for FMO04075

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:40
Well:75
Vector:pMK33-CFH-BD
Associated Gene/TranscriptDsk-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04075.5prime Sequence

466 bp (466 high quality bases) assembled on 2008-08-11

> FMO04075.5prime
ACATTATACGAAGTTATCAGTCGACATGGGACCTAGAAGCTGTACGCACT
TCGCCACGCTGTTTATGCCACTCTGGGCATTAGCCTTCTGCTTCCTGGTG
GTGCTGCCGATCCCAGCGCAGACGACTAGTCTACAGAACGCTAAGGATGA
TCGGCGACTACAGGAATTGGAGTCAAAAATTGGTGGGGAAATCGATCAGC
CCATTGCGAATTTAGTTGGACCATCATTCTCTCTATTCGGGGACAGGCGT
AATCAGAAAACAATGAGCTTCGGTCGCAGAGTGCCACTAATTTCACGCCC
AATAATACCAATTGAGCTGGATCTCCTCATGGATAATGATGACGAAAGAA
CGAAAGCTAAGCGGTTTGATGATTACGGCCATATGAGGTTTGGTAAAAGG
GGAGGTGATGATCAGTTCGATGACTACGGTCACATGCGTTTCGGCCGAGC
AAGCTTTCTAGACCAT

FMO04075.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsk-RA 569 CG18090-RA 27..450 25..448 2120 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:15:39
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4189811..4190234 448..25 2120 100 Minus
Blast to na_te.dros performed on 2014-11-28 19:15:40 has no hits.

FMO04075.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:16:44 Download gff for FMO04075.5prime
Subject Subject Range Query Range Percent Splice Strand
Dsk-RA 19..453 18..452 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:17:01 Download gff for FMO04075.5prime
Subject Subject Range Query Range Percent Splice Strand
Dsk-RA 207..641 18..452 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:52:40 Download gff for FMO04075.5prime
Subject Subject Range Query Range Percent Splice Strand
Dsk-RA 19..453 18..452 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:52:40 Download gff for FMO04075.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 4189807..4190242 18..452 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:16:44 Download gff for FMO04075.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15529..15964 18..452 98   Minus