FMO04084.5prime Sequence
505 bp (505 high quality bases) assembled on 2008-08-11
> FMO04084.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTTCTTGTCAA
CCGGCCGGAATTTCTTTCGTGTTTTCAGCTCTCGCCAAATAGCAAGCTGC
AGTGCTAGAATGGCAAGCGAAGTGGAAAAATCGCAAACGGCAGCCGCCAG
TGAAGACACCATTTTCGGCAAGATTTTGCGCAAGGAGATCCCATGCAAAT
TTATCCACGAGGATGATAAATGCGTTGCCTTCCACGATGTGGCGCCCCAG
GCACCAACCCACTTCCTCGTGATTCCTCGCAAGCCAATTGCCCAACTCTC
GCTAGCCGAGGATGGAGATGCCGATCTGCTGGGACATCTCATGCTGGTGG
GCCGCAAGGTGGCCAAGGAGCTCGGCCTCGCGGATGGCTACCGCGTGGTC
ATCAACAATGGCAAGCACGGCGCCCAGTCAGTTTACCACTTGCATTTGCA
CTTCCTCGGCGGCCGCCAGATGCAGTGGCCACCAGGAGCAAGCTTTCTAG
ACCAT
FMO04084.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:32:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2862-RC | 548 | CG2862-RC | 17..466 | 38..487 | 2250 | 100 | Plus |
| CG2862-RA | 644 | CG2862-RA | 17..466 | 38..487 | 2250 | 100 | Plus |
| CG2862-RB | 556 | CG2862-RB | 63..474 | 76..487 | 2060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:32:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2770460..2770726 | 221..487 | 1335 | 100 | Plus |
| 2L | 23513712 | 2L | 2770256..2770400 | 76..220 | 725 | 100 | Plus |
| 2L | 23513712 | 2L | 2770151..2770191 | 38..78 | 205 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:32:14 has no hits.
FMO04084.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:41:07 Download gff for
FMO04084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2862-RA | 14..470 | 33..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:16:27 Download gff for
FMO04084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2862-RA | 12..468 | 33..492 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:21:48 Download gff for
FMO04084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2862-RA | 14..470 | 33..492 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:21:48 Download gff for
FMO04084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2770148..2770191 | 33..78 | 95 | -> | Plus |
| 2L | 2770259..2770400 | 79..220 | 100 | -> | Plus |
| 2L | 2770460..2770730 | 221..492 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:41:07 Download gff for
FMO04084.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2770148..2770191 | 33..78 | 95 | -> | Plus |
| arm_2L | 2770259..2770400 | 79..220 | 100 | -> | Plus |
| arm_2L | 2770460..2770730 | 221..492 | 99 | | Plus |
