FMO04095.5prime Sequence
472 bp (472 high quality bases) assembled on 2008-08-11
> FMO04095.5prime
GTATAGCATACCTTATACGAAGTTATCAGTCGACATGTTCAAATACTTCG
TTTTCGCCGTTTTCTGCCTGGCCAGCGCTGCTGCTGCTCCTGGCTATTTG
GGCGGATTAGCTGCTCCGGCCTTGCCGCTGACTGCAGCTGCTCCGGCCAT
CTCCTATGGACACGCCTTGGCTGCTCCCTCGATTGCCTCTTACGGGCTGG
CCCCCAGGCTTAGCTATGCCGCCCCGGCCTTGGCGCACGCTCCTCTGGCT
GCTCCGGCCCTTTCCGCCTACGGATTGGGATATGGTCCCGGTCCCATTGG
CCTGGCTCATGGTCCTTTGGGACTAGCTCACGCCCCTCTGGCCGCTCCCT
TGGGATTGGGCTACAAGTCGGCATATCCTACTCTGGGTGCTCCTCTGGGA
CTGGGCTACAAGACAGCTCTTGCTGCTCCTGCCTATGGACTCGCTCATGG
ATGGGCAAGCATTCTAGACCAT
FMO04095.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:12:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13065-RA | 677 | CG13065-RA | 53..472 | 35..454 | 2100 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:12:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16277560..16277975 | 39..454 | 2050 | 99.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:12:36 has no hits.
FMO04095.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:15 Download gff for
FMO04095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13065-RA | 53..475 | 35..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-11 09:18:11 Download gff for
FMO04095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13065-RA | 55..477 | 35..458 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:44:59 Download gff for
FMO04095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13065-RA | 53..475 | 35..458 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:44:59 Download gff for
FMO04095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16277568..16277978 | 47..458 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:15 Download gff for
FMO04095.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16270668..16271078 | 47..458 | 99 | | Plus |
