FMO04101.5prime Sequence
435 bp (435 high quality bases) assembled on 2008-08-22
> FMO04101.5prime
TTATCAGTCGACATGTCCCTGTTAAACAATGACGACAGCATTCCCAACAT
GGACGAGGATCCACAGGTGGTCATTCCGGACGACGAGCCACCGGCGACGG
GACGAATGCCCAGTGGGAGGTCCATGGACTCGTTGCGTTCATCGTTCACC
AACCGCAGTTCCACGCCAGATTCATCGCACAATTCGCTGGAGGCCATGGA
AATGGCCCAGGACGATCGGGAGGAGAAGGCCCGCCTCATCACACAGGTCC
TGGAGCTGCAGAACACCCTGGACGACCTGTCGCAACGCGTCGATTCCGTC
AAGGAGGAAAATCTGAAGCTGCGCTCCGAGAACCAGGTGCTCGGCCAGTA
CATCGAGAACCTGATGTCGGCCTCATCGGTGTTCCAGTCCACCAGTCCCA
GTGCGGCCAAAAAGAAGGCAAGCTTTCTAGACCAT
FMO04101.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5934-RA | 784 | CG5934-RA | 126..531 | 12..417 | 2030 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 27273962..27274312 | 67..417 | 1755 | 100 | Plus |
| 3R | 32079331 | 3R | 27273830..27273885 | 12..67 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:45 has no hits.
FMO04101.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:11 Download gff for
FMO04101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5934-RA | 122..541 | 5..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:23 Download gff for
FMO04101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5934-RA | 123..542 | 5..429 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:48 Download gff for
FMO04101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5934-RA | 122..541 | 5..429 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:48 Download gff for
FMO04101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 27273826..27273885 | 5..67 | 95 | -> | Plus |
| 3R | 27273963..27274322 | 68..429 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:11 Download gff for
FMO04101.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 23099548..23099607 | 5..67 | 95 | -> | Plus |
| arm_3R | 23099685..23100044 | 68..429 | 98 | | Plus |
