FMO04104.5prime Sequence
440 bp (440 high quality bases) assembled on 2008-08-22
> FMO04104.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGATGTTTGGGGA
TTCTGCGTCAGCGACACCACAATGGCATATGGCGGGTCCATGCGCAGCGG
CTACTACCGCGACTACGAGGAGTTCCCCTATGGTACCCTGGAGTCCACCA
CTTCCTCACACGCGGTCAAGGACTGCTACAGTCGAGTGCAAGAAAAGTGC
AAGCAGATAAAGTCCGAGAAGCAGATGCGCAAGGACTGCCCATTCTGCAA
GGAGCACAAGAAGCGGCCGCTCATCAACTACATGCGCAAGCGGGAGCAAA
GGAAGCACCATGACAGCATCTGCGAGGACGAGGAGGACATGCACGAGCAC
GAGCATGAGCTGGAGCACACCCACAATCACAGCCAGTCGACCGTCCTTGC
CGCCCCGCAAAGCTGCAAGGTGGCAAGCTTTCTAGACCAT
FMO04104.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fok-RC | 1903 | CG43690-RC | 334..723 | 33..422 | 1950 | 100 | Plus |
| fok-RA | 1205 | CG43690-RA | 334..723 | 33..422 | 1950 | 100 | Plus |
| fok-RD | 696 | CG43690-RD | 334..493 | 33..192 | 800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 23:00:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20082786..20083017 | 422..191 | 1160 | 100 | Minus |
| 2L | 23513712 | 2L | 20084578..20084737 | 192..33 | 800 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 23:00:14 has no hits.
FMO04104.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:02 Download gff for
FMO04104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fok-RA | 327..723 | 28..422 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:26 Download gff for
FMO04104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fok-RA | 324..720 | 28..422 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:32:25 Download gff for
FMO04104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fok-RA | 327..723 | 28..422 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:32:25 Download gff for
FMO04104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20082786..20083015 | 193..422 | 100 | <- | Minus |
| 2L | 20084578..20084739 | 28..192 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:02 Download gff for
FMO04104.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20082786..20083015 | 193..422 | 100 | <- | Minus |
| arm_2L | 20084578..20084739 | 28..192 | 98 | | Minus |
