FMO04106.5prime Sequence
588 bp (588 high quality bases) assembled on 2008-08-22
> FMO04106.5prime
TCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGGCGCTCCAAAT
AGCGCAGAACAACCGCGACGGCCAGCAGCTGGTGGGCGCTGATCAGGGAA
AGGTGGAGGTGTACGTGCTGTTTGCAAACACCACCTATCGCACCCTGGAT
CTGTACTGGGTGTGCGAGCGGGAGCGGGAGAACATGTACCTTACCCTCAA
GCCCTTCGAGGAGGTGCGGGTGAACACGTTCACCACACACAGCTGGCTGT
TCCGGGATTACTACACGGGCGAACGGATGCACGTACGCTCGCAGAGGATC
TTTCAGCCGATTCGGGTGCGGGTACCCAAGAGCCAGCAGAGTCCGGATCA
GCTGGTTGACGTACGCAGCGAAGTGCTGATCCACTTTCCGATGAGATCGC
TGCGCGAAAACTGCCTCTGGCTGGTCGCCCGCTGGCTGATCCGGACGAGC
AACGCGCCACGGAGGATTATCCACGGATACCACATACCCTCGACGCTGAA
GCAACAGCTGCTCAGCCTGCTGACCTGCATCGAGTCCTATTCCCGAGTGG
CGGGCACGCGACGTCGGCGTGCAAGCTTTCTAGACCAT
FMO04106.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:28:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Vhl-RB | 946 | CG13221-RB | 154..687 | 37..570 | 2670 | 100 | Plus |
| Vhl-RA | 1309 | CG13221-RA | 154..687 | 37..570 | 2670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:28:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11279878..11280411 | 37..570 | 2670 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:28:47 has no hits.
FMO04106.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:43:14 Download gff for
FMO04106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vhl-RA | 151..687 | 34..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:29 Download gff for
FMO04106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vhl-RA | 150..686 | 34..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:50 Download gff for
FMO04106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Vhl-RA | 151..687 | 34..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:50 Download gff for
FMO04106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11279875..11280411 | 34..570 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:43:14 Download gff for
FMO04106.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7167380..7167916 | 34..570 | 99 | | Plus |
