Clone FMO04107 Report

Search the DGRC for FMO04107

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:41
Well:7
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG14419-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04107.5prime Sequence

638 bp (638 high quality bases) assembled on 2008-08-22

> FMO04107.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCGCGCTTCCATA
CTGTTTTTCGGCCTGCTGCTGGTGGCCAGCTGCTCCACGATTTTGGCCAG
GCCACAGGAGAGCACTACGCCGAGCACCACCACCTCAACCACCACCACCA
CGACGACTCCGAAGCCTAAAGAGTCGTCTACAACCACTACGACTACGACG
ACGACAACGGAAAAGCCCAAGTCAGAGTCCACAACTGCCAGTACGACTAC
CACAAGCACCACCCCGAGCACCACCACCAGCACCACTCCCAGCACCACTC
CCAGCACCACTCCCAGCACCACCCCGAGCACCACCACAACCACTACTACG
ACCACCACTCCAAAGCCCGATGATGATGAGGCCGCCAAGCTGCTGCAACA
ATGTGCCGAGTTGAGCCGCCGGAAGAAGCGGGGTGGATCTTCCTCGTCCG
AAGAGGACGACAGTGGCGAGAAGAAATCGGCAAAGAAGGAGCGCAAGCAG
TTGAAGAAACTGTGCAAGCAGTTGAAGAAGCAGCAGGAGCGCAAGCAGGA
GAAGGCCCAGAAATCGGCACTATCGGAACTGGCCGAGGCCTTGAAAAACT
ACAACCAAAAGCAGAAGAACGCAAGCTTTCTAGACCAT

FMO04107.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG14419-RA 729 CG14419-RA 44..628 36..620 2925 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 2885287..2885871 620..36 2925 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:25:33 has no hits.

FMO04107.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:46:13 Download gff for FMO04107.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14419-RA 33..631 26..624 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:31 Download gff for FMO04107.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14419-RA 30..628 26..624 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:05:53 Download gff for FMO04107.5prime
Subject Subject Range Query Range Percent Splice Strand
CG14419-RA 33..631 26..624 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:05:53 Download gff for FMO04107.5prime
Subject Subject Range Query Range Percent Splice Strand
X 2885284..2885882 26..624 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:46:13 Download gff for FMO04107.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 2779317..2779915 26..624 99   Minus