FMO04110.5prime Sequence
507 bp (507 high quality bases) assembled on 2008-08-22
> FMO04110.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGCTCCGACGA
CCAGAGTGCCGGGGACAGGATCCAGAAGGGATTCCAGATCAACTATATGA
TTCTGCGGGATGCCGACAGCGGAAAAATAATCTGGCAGGAGAACAAGGAC
TTCTCGGCACCGGACCAGGAACATGAGGCCCGAGTGCCGGTGAAAATACT
CGACATGCGTGCCGTTTCCCGGGAGATCAACTTCAGCACCATCGAGTCGA
TGGAGAACTTTCGCCTGGACCAGAAGGTGCTCTTCAAGGGCCGCATCATG
GAGGAGTGGTTCTTTGAGATGGGATTCGTGGGTGCCAACACCACCAACAC
CTGGCAGTCGACAATCGAGGCGGCACCCGAATCCCAGATGATGCCTGCCA
AGGTCTTGAACGGCAATGTGACTATCCAAACCAGTTTCTACGACAACGAG
ACACTCATCACCAAATCGGTTGTGCGCCTGTACTACATTGCAAGCTTTCT
AGACCAT
FMO04110.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:46:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PrBP-RA | 1133 | CG9296-RA | 153..605 | 37..489 | 2250 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:46:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8685351..8685803 | 489..37 | 2250 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:46:56 has no hits.
FMO04110.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:28 Download gff for
FMO04110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PrBP-RA | 148..610 | 29..495 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:18 Download gff for
FMO04110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9296-RA | 147..609 | 29..495 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:11 Download gff for
FMO04110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PrBP-RA | 148..610 | 29..495 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:11 Download gff for
FMO04110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8685346..8685808 | 29..495 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:28 Download gff for
FMO04110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8685346..8685808 | 29..495 | 98 | | Minus |
