FMO04111.5prime Sequence
751 bp (751 high quality bases) assembled on 2008-08-22
> FMO04111.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGCGAAGTCGCACG
GAACTGGTGACCACCACTTTCGAGGAGAGCGACGAGGATGATTTCAGTCC
GGACGATTCCGACTCCGAGGAGGACTGGCGACCCACCAAGAAACGTCCGT
CCAAGCCATCTGGCTCCGATGGCGGCAGGAAGCGGAAATCGGCGGCAGCC
AATGCCTCGAAGGCCAAGCGCCGGATGGCCAAGGTGAGCGACGAGGAGTC
CGACGAAGAGGATGACCTAGAAACCGATCCCAGCGACGACGACTTTGACT
ACCCGTCGGCCAGCACTTCAAAGCGACCCCAGAGTCTGCCGCCCAAGAAG
CAATTTGTTAAGTTAAGCCAACTGGATTTGCTGGTAAAAAAGTCTGATCT
TATGGAAAACGACTGGCTAAAGAACAATCGCTTGTGTCTGTGGCGCAAAG
ATGAACAAACGAATCTGCTTCAGAAGTATCTGCGGGTCAAGTCGGCTGCC
GAGGAGGAGGAGCTGCTCTTTACCTCCAGTTCTGTATATTCCAGTTGGGA
TGATCAGCAGACGAGCGACTTCATAGAGGTCAAAGTCAACTGCTTGGATC
CCAACAACAGACGTATTAAACTGCACGATCTGGAGGCGATTAAGAAAATC
TCCGTGGAACTACAATCAGAGCGAAATAAGAAAACGACATCGGACAAAGA
AGATACTTTGGAGGCGGAGGAGGATAAGCAAATGCAAGCTTTCTAGACCA
T
FMO04111.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:47:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13108-RA | 1021 | CG13108-RA | 114..810 | 36..732 | 3485 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:47:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9164348..9164848 | 36..536 | 2505 | 100 | Plus |
| 2L | 23513712 | 2L | 9165020..9165215 | 537..732 | 980 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:47:07 has no hits.
FMO04111.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:50:35 Download gff for
FMO04111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13108-RA | 101..824 | 24..744 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:19 Download gff for
FMO04111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13108-RA | 101..824 | 24..744 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:29:15 Download gff for
FMO04111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13108-RA | 101..824 | 24..744 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:29:15 Download gff for
FMO04111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9164335..9164848 | 24..536 | 99 | -> | Plus |
| 2L | 9165020..9165229 | 537..744 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:50:35 Download gff for
FMO04111.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9164335..9164848 | 24..536 | 99 | -> | Plus |
| arm_2L | 9165020..9165229 | 537..744 | 97 | | Plus |
