FMO04115.5prime Sequence
544 bp (544 high quality bases) assembled on 2008-08-22
> FMO04115.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATGCAGTGCA
GCCGAATGACGACGACGTTGAAGATGACGAACCTTCTGCTAGCAGTGGCC
TGCGCCGCCGTGCTGATGGGATCGGCGACGGCGGACGAGGAGGAGGGGTC
CATGACCGTGGACGAGGTGGTGGAGCTGATCGAGCCCTTTGGCGACGCCT
GCACGCCAAAGCCGTCGAGGGAGAACATCGTCGAGATGGTGCTGAACAAG
GAGGACGCCAAGCACGAGACCAAGTGCTTCCGCCACTGCATGCTGGAGCA
GTTCGAGCTGATGCCCGAGGATCAGTTGCAGTATAACGAGGACAAGACGG
TCGATATGATCAACATGATGTTCCCGGATCGCGAGGACGACGGCAGGCGC
ATCGTCAAGACCTGCAACGAGGAGCTAAAGGCCGAGCAGGACAAGTGCGA
GGCAGCCCACGGGATCGCTATGTGCATGCTGCGCGAGATGCGCTCTTCGG
GCTTCAAGATTCCCGAGATCAAGGAAGCAAGCTTTCTAGACCAT
FMO04115.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp19b-RA | 645 | CG1670-RA | 13..501 | 38..526 | 2445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20416993..20417219 | 221..447 | 1135 | 100 | Plus |
| X | 23542271 | X | 20416745..20416928 | 38..221 | 920 | 100 | Plus |
| X | 23542271 | X | 20417587..20417668 | 445..526 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:15:30 has no hits.
FMO04115.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:08:57 Download gff for
FMO04115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp19b-RA | 6..507 | 31..532 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:43 Download gff for
FMO04115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp19b-RA | 17..518 | 31..532 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:15 Download gff for
FMO04115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp19b-RA | 6..507 | 31..532 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:15 Download gff for
FMO04115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20416738..20416928 | 31..221 | 97 | -> | Plus |
| X | 20416994..20417216 | 222..444 | 100 | -> | Plus |
| X | 20417587..20417674 | 445..532 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:08:57 Download gff for
FMO04115.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20287765..20287955 | 31..221 | 97 | -> | Plus |
| arm_X | 20288021..20288243 | 222..444 | 100 | -> | Plus |
| arm_X | 20288614..20288701 | 445..532 | 96 | | Plus |
