FMO04118.5prime Sequence
499 bp (499 high quality bases) assembled on 2008-08-22
> FMO04118.5prime
GTATAGCATACCTTATACGAAGTTATCAGTCGACATGCTTAAGCTATGGC
TAATATGTATCTTGACTGTCAGCGTGGTCTCCATACAGAGTCTCTCACTT
CTGGAGGAAACCAATTACGTGTCAGATTGCCTGGCCAGCAATAACATCAG
CCAGGCTGAATTCCAGGAACTCATCGATCGCAACAGCTCCGAAGAGGATG
ACCTCGAGAATACCGACAGAAGATACAAATGCTTCATCCATTGCCTAGCG
GAGAAGGGAAATCTTTTGGATACCAATGGCTATTTGGATGTGGATAAAAT
TGATCAAATTGAGCCCGTGAGCGATGAACTGCGAGAGATACTCTACGATT
GCAAGAAAATCTACGATGAGGAAGAAGATCATTGCGAATATGCGTTTAAG
ATGGTGACTTGTCTAACTGAAAGCTTCGAGCAGAGCGATGAGGTCACCGA
AGCGGGTAAAAATACAAACAAATTAAACGAAGCAAGCTTTCTAGACCAT
FMO04118.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp57c-RA | 557 | CG13421-RA | 84..530 | 35..481 | 2235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20503781..20504175 | 87..481 | 1975 | 100 | Plus |
| 2R | 25286936 | 2R | 20503667..20503720 | 35..88 | 270 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:15:41 has no hits.
FMO04118.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:09:06 Download gff for
FMO04118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57c-RA | 84..533 | 35..485 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:48 Download gff for
FMO04118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57c-RB | 53..502 | 35..485 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:43:22 Download gff for
FMO04118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp57c-RA | 84..533 | 35..485 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:43:22 Download gff for
FMO04118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20503664..20503720 | 33..88 | 96 | -> | Plus |
| 2R | 20503783..20504178 | 89..485 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:09:06 Download gff for
FMO04118.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16391169..16391225 | 33..88 | 96 | -> | Plus |
| arm_2R | 16391288..16391683 | 89..485 | 99 | | Plus |
