FMO04119.5prime Sequence
478 bp (478 high quality bases) assembled on 2008-08-22
> FMO04119.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGGTTTTCGTTG
CCATCTGCGTGCTGATTGGACTGGCCTCCGCCGACTATGTGGTGAAGAAC
CGACACGACATGCTGGCCTACCGCGATGAGTGCGTCAAGGAGCTGGCCGT
GCCCGTGGATCTGGTGGAGAAGTACCAGAAGTGGGAGTACCCCAACGACG
CCAAGACCCAGTGCTACATCAAGTGCGTCTTCACCAAGTGGGGCCTGTTC
GACGTCCAGAGCGGTTTCAACGTGGAGAACATCCACCAACAGCTGGTGGG
CAACCACGCTGACCACAACGAGGCCTTCCACGCCTCCTTGGCCGCCTGCG
TGGACAAGAACGAGCAGGGATCCAATGCCTGCGAGTGGGCCTACCGCGGA
GCCACCTGTCTGCTGAAGGAGAACCTGGCCCAGATCCAGAAGAGCCTGGC
CCCGAAGGCCGCAAGCTTTCTAGACCAT
FMO04119.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Obp99a-RB | 561 | CG18111-RB | 60..485 | 35..460 | 2130 | 100 | Plus |
| Obp99a-RA | 610 | CG18111-RA | 60..485 | 35..460 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29671822..29672209 | 73..460 | 1940 | 100 | Plus |
| 3R | 32079331 | 3R | 29671716..29671755 | 35..74 | 200 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:19:04 has no hits.
FMO04119.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:17:54 Download gff for
FMO04119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp99a-RA | 53..485 | 28..460 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:16:50 Download gff for
FMO04119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp99a-RA | 50..482 | 28..460 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:29 Download gff for
FMO04119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Obp99a-RA | 53..485 | 28..460 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:29 Download gff for
FMO04119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29671709..29671754 | 28..73 | 93 | -> | Plus |
| 3R | 29671823..29672209 | 74..460 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:17:54 Download gff for
FMO04119.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25497431..25497476 | 28..73 | 93 | -> | Plus |
| arm_3R | 25497545..25497931 | 74..460 | 100 | | Plus |
