Clone FMO04125 Report

Search the DGRC for FMO04125

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:41
Well:25
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30373-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO04125.5prime Sequence

530 bp (530 high quality bases) assembled on 2008-08-22

> FMO04125.5prime
CTTCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGCTGCGTTTG
CTTACAAAAACAAGGGTGCTGCGCCAACTGATGCCAGCGACAGGCGCCAC
TCCACCTGCATCCCGCTTCTATGCGAAGAACCAAGGAGCAGCCAGCCAAA
AATCGGATGACGACATGGTCAGCGATGAGCCCATCAAGTTTTTCGGCAGC
CAGGCGGCCACTTGGCGCGCCAAGGACACCCGCAGTGGTGGCAGCGACGA
GACCCTTTGGTACCAACCCTACGTAATCTCCGCCAGCCTGGCCATCTTCC
TCCTGTACTTCTGTGCGCTGCGCGAGGAGAGCGACATCGATCTCCGGTTG
GAGGGCAACTTGTACGAGCATGTCAGTGGTCTGGAGGAGGTGCAGCTGAC
TGTCAACTACAGGTACAACAAGGAACACGGACTGGACACCAAGGAGCAGG
AGAGACGGCTCAGGGAACTGGGCGTTGATCTGGGCCAGTTGGATGCCAAG
TTGGCCGCCCAGGCAAGCTTTCTAGACCAT

FMO04125.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG30373-RB 720 CG30373-RB 179..652 39..512 2370 100 Plus
CG30373-RA 610 CG30373-RA 69..542 39..512 2370 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:35
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8164068..8164507 512..73 2200 100 Minus
Blast to na_te.dros performed on 2014-11-28 20:36:36 has no hits.

FMO04125.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:44 Download gff for FMO04125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 57..542 27..512 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:28:47 Download gff for FMO04125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 53..538 27..512 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:02 Download gff for FMO04125.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30373-RA 57..542 27..512 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:02 Download gff for FMO04125.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8164068..8164506 74..512 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:44 Download gff for FMO04125.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4051573..4052011 74..512 100 <- Minus