FMO04125.5prime Sequence
530 bp (530 high quality bases) assembled on 2008-08-22
> FMO04125.5prime
CTTCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGCTGCGTTTG
CTTACAAAAACAAGGGTGCTGCGCCAACTGATGCCAGCGACAGGCGCCAC
TCCACCTGCATCCCGCTTCTATGCGAAGAACCAAGGAGCAGCCAGCCAAA
AATCGGATGACGACATGGTCAGCGATGAGCCCATCAAGTTTTTCGGCAGC
CAGGCGGCCACTTGGCGCGCCAAGGACACCCGCAGTGGTGGCAGCGACGA
GACCCTTTGGTACCAACCCTACGTAATCTCCGCCAGCCTGGCCATCTTCC
TCCTGTACTTCTGTGCGCTGCGCGAGGAGAGCGACATCGATCTCCGGTTG
GAGGGCAACTTGTACGAGCATGTCAGTGGTCTGGAGGAGGTGCAGCTGAC
TGTCAACTACAGGTACAACAAGGAACACGGACTGGACACCAAGGAGCAGG
AGAGACGGCTCAGGGAACTGGGCGTTGATCTGGGCCAGTTGGATGCCAAG
TTGGCCGCCCAGGCAAGCTTTCTAGACCAT
FMO04125.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30373-RB | 720 | CG30373-RB | 179..652 | 39..512 | 2370 | 100 | Plus |
CG30373-RA | 610 | CG30373-RA | 69..542 | 39..512 | 2370 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 8164068..8164507 | 512..73 | 2200 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:36:36 has no hits.
FMO04125.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:34:44 Download gff for
FMO04125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 57..542 | 27..512 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2010-07-30 09:28:47 Download gff for
FMO04125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 53..538 | 27..512 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:09:02 Download gff for
FMO04125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30373-RA | 57..542 | 27..512 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:09:02 Download gff for
FMO04125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 8164068..8164506 | 74..512 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:34:44 Download gff for
FMO04125.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 4051573..4052011 | 74..512 | 100 | <- | Minus |