FMO04130.5prime Sequence
351 bp (351 high quality bases) assembled on 2008-08-22
> FMO04130.5prime
CCACCGCCGAACGCGAATGACAACTACAATCAATTCGGTGACCATCAAAT
CAGGAACAACAATGCAGCCCAGAAGAAGCTGCAGCAGACCCAAGCCAAGG
TGGACGAGGTGGTCGGGATTATGCGTGTGAACGTGGAGAAGGTCCTGGAG
CGGGACCAGAAGCTATCGGATGTGGGCGAGCGTGCGGATCAGCTGGAGCA
GGGAGCATCCCAGTTCGAGCAGCAGGCCGGCAAGCTGAAGCGCAAGCAAT
GGTGGGCCAACATGAAGATGATGATCATTCTGGGCGTGATAGCCGTTGTG
CTGCTCATCATCGTTCTGGTGTCGCTTTTCAATGCAAGCTTTCTAGACCA
T
FMO04130.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:52:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syb-RB | 1139 | CG12210-RB | 210..542 | 1..333 | 1635 | 99.4 | Plus |
| Syb-RC | 921 | CG12210-RC | 210..532 | 1..323 | 1585 | 99.4 | Plus |
| Syb-RD | 1070 | CG12210-RD | 194..473 | 54..333 | 1370 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:52:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10250879..10251197 | 319..1 | 1565 | 99.4 | Minus |
| 3L | 28110227 | 3L | 1635328..1635439 | 240..129 | 230 | 80.4 | Minus |
Blast to na_te.dros performed 2014-11-28 22:52:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| flea | 5034 | flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). | 3502..3540 | 345..307 | 105 | 74.4 | Minus |
FMO04130.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:06:02 Download gff for
FMO04130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syb-RB | 210..542 | 1..333 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:17:12 Download gff for
FMO04130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syb-RB | 202..534 | 1..333 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:28:26 Download gff for
FMO04130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syb-RB | 210..542 | 1..333 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:28:26 Download gff for
FMO04130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10250879..10251197 | 1..319 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:06:02 Download gff for
FMO04130.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6138384..6138702 | 1..319 | 99 | | Minus |
