FMO04137.5prime Sequence
932 bp (834 high quality bases) assembled on 2008-08-22
> FMO04137.5prime
ATCACGATGAGAATATTCTCGAGTGCGAGCAGGACTTTGTGAAGGCCCAA
GGACCTAAGGAATCAATTTTTGTCTACAAAAATCCTGTTGTGGAGAGGGC
AGCCAAGTATGCCAAGAGACTTCGCGAACGCTTTAACGAGGAGGACAAGA
AGCTATCGATTATCCTCCAGAACGATGGAACCCGCGTCCTGACAGAGGCC
AAGAAATCAGCCCACCGCACCATGGGCTGTGCTCACACTCCGATTGACCC
ACCGTGCGCCTATTTGCGCAAGAGCCAGGGCATCAAATGGCGGCGAGAGA
ACACCCACAAGTGTCCCAAGATGCCGCCAATGCCCCCACTACCACCACCG
GGCAGTGGCGGCAAAAAGCCGGCAATGGTACCTAACTTCATCAAACGCAA
CAAGATATGTGCCGGACAAACGGTTCCCTGTCCCCCGCCACCTCGTTATG
TAGACACTCCCGTGGGAGCTCGTCACGATCTACTCAATTCCGGATTGGTA
CCGCAGTTTATCTGCCGCAAGGATTTCGGCAAGGTGCCTGTTTACCTCAA
GAAAACCAAGAGGATGTTGGCCGACATGAATGCGGTGTGTGCCCAAGGAA
CAGGCACGTTTTGCTGGAGCTGTGCCGCGGTATCCAAGGGTTTCACCAGG
GCATCCCGTCCAATCAAGTGGTCCGCCGCCAATGCCGGGTATGCGGGTGA
TGGAGCAGGCCGAGCGAAATGAGATCCCTCGAGGGACTGCGACTGAACCC
TGACGAAATGACCAAGCAGTATCAGTCGATGTCGCTCCTAATCGACAGCA
TCGCCAAGCGGGCAACGGCAAAGCAAGCTGGAGTCCGATCCTTCGCAGGG
TGGAAGCAGGACATTCTGCTAATCGAGACCACTCCCATTTATCTATTGTT
TCCGAAGTACTCAGCTTTTCTAGAACCTATCG
FMO04137.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:54:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16984-RA | 1162 | CG16984-RA | 112..1011 | 1..911 | 4115 | 97.7 | Plus |
| CG12182-RC | 3493 | CG12182-RC | 2488..3303 | 911..85 | 3695 | 97.5 | Minus |
| CG12182-RC | 3493 | CG12182-RC | 3360..3443 | 84..1 | 420 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:54:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2596032..2596828 | 85..889 | 3445 | 97.5 | Plus |
| 3L | 28110227 | 3L | 2595892..2595975 | 1..84 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:54:11 has no hits.
FMO04137.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:36 Download gff for
FMO04137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16984-RA | 112..1011 | 1..911 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:17:23 Download gff for
FMO04137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16984-RA | 80..979 | 1..911 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:40:47 Download gff for
FMO04137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16984-RA | 112..1011 | 1..911 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:40:47 Download gff for
FMO04137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2595892..2595975 | 1..84 | 100 | -> | Plus |
| 3L | 2596032..2596847 | 85..911 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:36 Download gff for
FMO04137.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2595892..2595975 | 1..84 | 100 | -> | Plus |
| arm_3L | 2596032..2596847 | 85..911 | 97 | | Plus |
