FMO04144.5prime Sequence
1009 bp (1009 high quality bases) assembled on 2008-08-22
> FMO04144.5prime
ATTATACGAAGTTATCAGTCGACATGATGTACAACAACCGACCCACGGCT
ATCAGTCTAGAAGAGGAGGTTCAATATATCTATAAGTACCCTTTGCTGCC
GACTCCACTGATTGATTATGGATTTATCTACAATCTGGTTTGCAACAAGC
CTCGGGATGTCAGTGTGCCGTTGATCCTAGAAATTGAGACAGAGTTCAAG
TCCAAAGACAGTGCTCCTGAGAAGCCAAAGAAGGTGCCTAGGCTTTCATA
CCATTCCCGATCGAGTTCAATGAGTGAAGATGAACCGGAACCGGAAGTGC
AAGTTAAATACCAGTGGAACTCGCCGCGGCTGATGATTCTCTGCGAAGAT
GGAGACATCAATTGCGCTTTGCACTATCTCGTTGAGTCTCTTCACGATCC
CTTCGCCTGCAATGCGGTGGCCACTCTTTTCTTGCAGGAATCCATATTGG
AGGAGTTCGTGGATCGCATAAGGGATCGCCTGGAACCGTTGAGCACGGAT
ATCTCCGGGCATCCGGTTTATATAATGACACTGGAGAGAATAGGTCACTT
ACAGGCAAAGAGAATAGTTGGAAATCCCAAGACTGTTCCAGAAAATGCTA
GTCCCATGCTGGTCTACGACCTTAGCCATCGTTACTTGGCTGATGGACCC
ACCGGGGTCATAACCCTGCACACCTTTCGAACCATGAAGGAGGCCGTTGA
GCTGCAGGCTAAGGAACCACTTAACTTTACCTCTGTGTGCATTTCGGAAC
GAAAAACTGGCAGCCGCCTACGAACTGGTGGCCCGATTAAGTCCCGCTGA
TCTTCACGATTAATTGTTACTACGTTAATCTGAACGAAATCACTCTGCCC
TTCGTTTGCAACTTTAACTCCGCAAGATATCGACGGCTACCACTACGAGT
CATTGACCTTTAAGGGAAAGCGCAAAGTGGTTGTCCATCAGTTGGCACCA
TCTGGGCAAAGTTGGCCCGCGAGGCACTCGTTCCAGTACTCATAGCATTT
CTAGAACAT
FMO04144.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:47:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2336-RA | 1358 | CG2336-RA | 134..1100 | 24..990 | 4700 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:47:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6581073..6582005 | 50..981 | 4430 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:47:04 has no hits.
FMO04144.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:09:19 Download gff for
FMO04144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2336-RA | 134..1103 | 24..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:17:38 Download gff for
FMO04144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2336-RA | 64..1033 | 24..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:25:53 Download gff for
FMO04144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2336-RA | 134..1103 | 24..993 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:25:53 Download gff for
FMO04144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6581073..6582016 | 50..993 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:09:19 Download gff for
FMO04144.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2406795..2407738 | 50..993 | 99 | | Plus |
