FMO04147.5prime Sequence
824 bp (824 high quality bases) assembled on 2008-08-22
> FMO04147.5prime
GGTGCGCGAGTTCAACGCCGCCAAGGAAGCTGTCGAGGCCACTAAAGCCC
AGTTGAACACTTGCAACGATGCCTATACGAGCGGTGCCTTCAAATACCTG
AGATTCCTGGTCCATCTCCTGGCGGCAGCGCAGTTTTCGTATGGGATATA
CTTTCACTACTTCCGGGTGCATTGGCCCACGGATTTGCTAGACGAGGATG
AACTGAAGGCGCGGTGGGGCGGCAAGTTCAAGTACCTTACCTTCTTGGAC
GTCATTCTACAGGCCATCTACCACTCATTGGCTCTGCTGAACGATCTCTT
CGGCGATAACAATGTCTCCGGGGATTCAAAATCCATGTTGCGATCGGTGA
GGGACTATGTGTTCGCCGCCTTTGCCTTTCCTGTCGCCCACAATGTCTGC
CTCTCGTTTTGGGTCATCTACGTGTGGGACCGTGAGCTCATCTTTCCCTC
AGCGCTGGATGCGATTTTCCCCAGCTGGTTGAATCACGTGGTACACACGA
ATGTGGCCCTTTTGGCCATTATGGACCTGTTTACCTGCTTCCGCCGCTAT
CCGAGTCGATTGGCAGGCATCACGGGCAACGTCTCCTTCATCCCTGCTTT
ACATCATCTGGCTGCACATTGTTCGCTACTTCAGTGGCGAGTGGGTGTAT
CCCATTCTGGAAGTGCTGCCCGCATACCTGCGCTACGTGTTCTTGGCACT
ACTTGTGGGGTTCAACCTGGTTTGCTATCTGCTCGGGGAGTTCGCCAACA
ACGTCGTTTGGGGTCCGGAGTTTAAGCTCCTAAATCAACAGAAATTAAAG
CAAGGCGCAAGCTTTCTAGACCAT
FMO04147.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11601-RC | 1378 | CG11601-RC | 69..873 | 1..806 | 4005 | 99.9 | Plus |
| CG11601-RB | 1077 | CG11601-RB | 69..873 | 1..806 | 4005 | 99.9 | Plus |
| CG11601-RA | 1151 | CG11601-RA | 143..947 | 1..806 | 4005 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:09:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 282654..283127 | 474..1 | 2370 | 100 | Minus |
| 2L | 23513712 | 2L | 282175..282508 | 806..472 | 1625 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:09:07 has no hits.
FMO04147.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:28:03 Download gff for
FMO04147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11601-RA | 143..947 | 1..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-22 17:17:19 Download gff for
FMO04147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11601-RA | 155..959 | 1..806 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:50:37 Download gff for
FMO04147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11601-RA | 143..947 | 1..806 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:50:37 Download gff for
FMO04147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 282175..282505 | 475..806 | 99 | <- | Minus |
| 2L | 282654..283127 | 1..474 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:28:03 Download gff for
FMO04147.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 282175..282505 | 475..806 | 99 | <- | Minus |
| arm_2L | 282654..283127 | 1..474 | 100 | | Minus |
